KEGG   Labrenzia sp. CP4: ACP90_25555
Entry
ACP90_25555       CDS       T04295                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
lap  Labrenzia sp. CP4
Pathway
lap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ACP90_25555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lap03400]
    ACP90_25555
Enzymes [BR:lap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACP90_25555
DNA repair and recombination proteins [BR:lap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ACP90_25555
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII PriA_CRR Helicase_C AAA_30 zf-CHY TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AMN55195
Position
complement(5557302..5559497)
AA seq 731 aa
MLFDDPDFQETIASVLVPVAVAGAYTYKVPPGQSVVPGTIVKVPLGPREVIGAVWDIEPD
AAINPKKLKTISHVYDKTPPLDDDLRRFVDWVANWTLGAPGMVLRMVLRSEEALEPEAPV
PGVRRIEGAEPDRLTPARGRVLATMEDGFAWTKSGLAHAAGVSASVIDGLLQQDVLETVL
MPAAPPPPKPQLDYAQKPLTPAQQAAADGLTACFGKGGAVALIDGVTGSGKTEVYFEAIA
EALRRGKQALVLLPEIALTEQFLRRFEQRFGVYPAEWHSQITVKNRSRVWRGVASGDVRV
VIGARSSLFLPFKELGLIIVDEEHDAAFKQDDRVPYSARDMAVVRGHLSGFPVVLASATP
SVESIVNAEVGRYKLFELPERASGAALPDLMAIDMRQDGPERGRWLAPGLVHGIAGTFAE
GGQSLLFLNRRGYAPLTLCRTCGHRFQCAHCSAWLVEHRFQKKLVCHHCGHQEPVPKACP
SCQSVDSLVACGPGVERIAEEVTELFPQARVLVLSSDIAGGPDRLKREMKIVEEGGADIV
IGTQLVAKGHNFPLMKLVGVVDADLGLAHGDPRAAEKTFQLLAQVTGRAGRVTGGGKGFL
QTYNADHPVIKALLSSDKKAFYQAEIEARRAAGLPPFGRLAAVIVSGPDRGFAEGFSRAI
ARAAPPDQAVTLLGPAEAALAMVRGRYRFRLLAMAPRQYDLQAYLRHWLSIGPKPTKGLR
LQVDIDPQHFL
NT seq 2196 nt   +upstreamnt  +downstreamnt
gtgctgttcgacgatccagacttccaggaaaccattgccagcgtgctggtgccggtcgcg
gttgcgggggcctatacctacaaggtgccgcccggccagtccgtggttccgggcaccatc
gtcaaggtaccgctcggcccgcgcgaggtgattggagctgtctgggatatcgagccggac
gcggccatcaatccaaagaaactgaagaccatttcccatgtctacgacaagacgccgccg
cttgatgatgatctgcgccggttcgtcgactgggtagcgaactggacacttggcgcaccg
gggatggtgctgcgcatggtgttgcggtccgaagaagcgctggaaccggaggcgcccgtt
cccggtgtccgccgtatcgaaggtgccgagcctgatcgtctgacgccggcacgcgggcgc
gttctggcgaccatggaagacggctttgcctggacgaaaagcggccttgcccacgctgcc
ggcgtgtccgcttccgtcatcgacggcctgcttcagcaagatgtcctggaaaccgtcctt
atgccggcggctcctccgccgccgaaaccgcaactggactatgcgcaaaaaccgctgacc
ccggcgcagcaggccgcggcagacggcctgactgcctgtttcggcaagggtggggccgtt
gccctgatcgacggtgtcaccggctcgggcaagacggaagtctattttgaggcgattgcc
gaagccttgcgcaggggaaagcaggcgctggtgctgctgcctgaaatcgcactcaccgaa
cagttcctgcggcgcttcgaacaacgcttcggggtctatccggccgaatggcattcccag
atcacggtcaagaaccgctcgcgggtctggcgcggtgtggcgtccggtgatgtgcgggtg
gtgataggggcccgctcctcgctgtttctgccgttcaaggaactaggcctgatcatcgtc
gatgaagaacatgatgcagccttcaagcaggacgaccgggtgccttacagcgcacgcgac
atggctgttgtccgcggccatctctccggcttccccgttgttctggcgtcggccacgcca
tccgtggaaagcatcgtcaacgcagaggtcggccgctacaagctgttcgagctacccgaa
cgggcatccggtgctgccctgccggacctcatggccatcgatatgcgccaggacgggccg
gaacggggacgctggctggcacctggtctggtccacggcatcgccggcacctttgccgaa
ggggggcagtcgctactgtttctcaatcggcgcggttatgcaccgctgaccctttgccgt
acctgcggccacaggttccaatgcgctcattgcagcgcctggctggtggagcatcgtttt
cagaaaaaactcgtctgccaccactgcggccatcaggagccggtccccaaggcctgtccg
tcctgccagtcggtagacagtctggttgcctgcggtcccggcgtggaaagaatcgccgag
gaagtgaccgagctctttccgcaggcgcgtgtgctcgtgctttcgtcggatattgccggc
gggccggatcggctgaagcgcgaaatgaagattgtcgaggaaggcggggccgacatcgtg
atcggcacgcagctggtcgccaaggggcataacttcccgctgatgaaactggttggcgtg
gtggatgcggaccttggccttgcccatggcgatccgagagctgcggaaaaaaccttccag
ctgcttgcccaggtgacaggccgtgcgggccgcgtcaccggcggcggcaaggggttcctg
cagacctacaatgcggatcatcccgtcatcaaggcgctgctttcaagcgacaagaaggcg
ttctatcaggccgagatcgaggcaaggcgggcagcaggtctgccgccgttcgggcgtctt
gccgcagtcatcgtctccggaccagacagaggatttgcggaaggcttctcaagggccatt
gcccgtgccgcaccgccggatcaggccgtcacgctccttgggcctgcggaagccgccctt
gccatggtgcgcggacgctatcgtttccgcctgctggcaatggccccccgccagtacgat
ctgcaagcgtatctgcggcattggctaagcatcggcccgaagcccacgaaggggctgcgc
ctgcaagtggacattgacccgcagcattttctctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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