KEGG   Candidatus Liberibacter asiaticus Ishi-1: CGUJ_03475
Entry
CGUJ_03475        CDS       T03607                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
lat  Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03030  DNA replication
lat03430  Mismatch repair
lat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGUJ_03475 (holA)
   03430 Mismatch repair
    CGUJ_03475 (holA)
   03440 Homologous recombination
    CGUJ_03475 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lat03032]
    CGUJ_03475 (holA)
   03400 DNA repair and recombination proteins [BR:lat03400]
    CGUJ_03475 (holA)
Enzymes [BR:lat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGUJ_03475 (holA)
DNA replication proteins [BR:lat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CGUJ_03475 (holA)
DNA repair and recombination proteins [BR:lat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CGUJ_03475 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta PilM TRAF6_Z2
Other DBs
NCBI-ProteinID: BAP26278
Position
complement(443915..444952)
AA seq 345 aa
MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA
LEIQKNISTFWNEINSTSLFSKKKIILIENLSTEKKVLDCLEEIIIKNICNHIIIIKSNE
IKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGD
RIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFF
LASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRI
WNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTACKK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggctacaatagaatctcataaattcattcaaaaatctacgaaaaatctttttctttct
cattttgtatttattttctatggatcagataaaggattaatatttgaattaattaaccaa
ttcaaaaaaaatataagtattacatatcatgatcccttttctcttgttgtcctaaatgct
ttagaaattcaaaaaaacatatcaacgttttggaatgaaataaactcaacaagtttattt
agtaaaaagaaaattattctaattgaaaacttatctactgaaaaaaaagtgttagactgt
ttagaagaaatcattataaaaaatatttgtaatcatattattattattaagtctaacgaa
ataaagaaaaacaataccttaaggaaaatagcagaaaaatttacatctgttcttgccata
tcttgttatcctgataataaaattcatttgatggacttaatagaggaaagtctcttgata
ggtcaaaaatcaatttccaaagaagcaaaacaaatattacttgcaaatttaggcggagat
cgtatagcttctcggaatgaactccagaaactatcatcttattgcttagaagatattttg
ataacagaacaacatgtaaaagacataatttgtgatacacatgtattgtatattgaagaa
attattaacgctactatacaagggaaaatatacaatgcaattatgctagctgattttttt
cttgcatcaaaaatgccttcacatgcactactacatggatttttacagaaatttcaatta
ctagaaaaaatccatataataaaagaatgctctaatatatctttcgaaaaaataatacaa
aaaactgaaaaaaatattatccctatgaaaagaaatatacttcaagaatccttacgaatt
tggaataaaaatctcgtacgagaaactttacataaaattgaccacagaatccatctagca
cggaaaaaaaaatatcttgaaaaaaatattatattccaaactatattatatattgcacaa
acagcttgtaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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