KEGG   Candidatus Liberibacter asiaticus Ishi-1: CGUJ_03581
Entry
CGUJ_03581        CDS       T03607                                 
Name
(GenBank) double-strand break repair helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
lat  Candidatus Liberibacter asiaticus Ishi-1
Brite
KEGG Orthology (KO) [BR:lat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lat03400]
    CGUJ_03581
Enzymes [BR:lat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CGUJ_03581
DNA repair and recombination proteins [BR:lat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     CGUJ_03581
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD AAA_30
Other DBs
NCBI-ProteinID: BAP26260
Position
422288..425845
AA seq 1185 aa
MIYHNSFQEHSETIDLISQTKSEQLLASDPTRSAWVSANAGSGKTHILVQRVLRLLLANA
HPSTLLCLTHTKAAAAEMSHRVLEIITAWSHLSDEILSAEITKIQGKKPNKSDMSKARHL
LITILETPGGLKVQTIHAFCEAIMQQFPLEANITSHFAIADEEQSKKLIEEAKKSTLASI
MLDNNEELKKAFYEILEISNDEDIETLISDIISNRTALKQFFSFSHTYGEEKLLKNRFGL
SLNESYELIYKDLWPLPYFQVSDINKYVSLSMETGNPTILKKAQTLQQASQTQCIEERFS
LLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASL
TLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQD
TSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKR
ATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGT
VQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGK
KRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRF
ILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKY
IHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSSL
QELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMH
IMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKH
SNTSNEKKSNQRTWYDMVYDSFHNDERVKKIKLTNSINKDEWIAYEWSTHHPENTPLERE
ETIKQLMDEQKIPKKLFSPIKNDINEPYILNPSTIDTKGKTNLESLLSDNQTFNRGLIIH
KLLQVIFTLPEHKRKNFITSYCTKNAKLWPAKEYKNLLLSITRLLENPMMTTAMSCDSYS
EVSVSGKINCPKKDIIISGRIDQISISQQNIFIFEYKTHHHVPQEIEHIPYTHIAQLSIY
EKILKDSYPNKSLVCLLIYVSEPKVFIIPQNKLNKAFAEISTKIP
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgatatatcataattcattccaggagcattcagaaaccatagatttaatatctcaaaca
aaatcagaacagttattagcatccgaccctacccgttctgcatgggtctctgctaacgct
ggctctgggaaaacccatattcttgttcaaagggttttgcgtcttctccttgcaaatgct
catccttctactcttttatgccttactcatacaaaagctgctgctgcagaaatgtcgcat
cgtgttcttgaaataattactgcatggtctcatttatccgacgaaattctttctgctgaa
atcacaaaaatacaaggtaaaaaaccaaataaaagtgatatgtcaaaagctcggcacttg
cttatcacgatcctagaaactcctggtggattaaaagttcaaacgatccacgctttttgt
gaagcgatcatgcaacaatttcccttagaagccaatattacgagtcattttgctatcgca
gacgaggagcaatctaaaaagctaatagaagaagcaaaaaaatcaacgcttgcatctatc
atgctagacaataacgaagagctcaaaaaagctttttatgaaatacttgaaatatcgaac
gatgaagatatagaaacactaatatctgacattatcagtaaccgtactgctcttaaacaa
tttttttctttttctcatacttatggagaagaaaaattattgaaaaatcgctttggtcta
tcgcttaatgaaagctatgaactgatctataaggatttatggcctttaccatactttcaa
gtaagtgatatcaacaagtatgtttccctatctatggaaactggcaaccctacaatatta
aaaaaagcacaaacacttcaacaagcatctcaaactcaatgtattgaagagcgttttagt
cttttatcttctttttttctaacccaaaaattcacccctcaaaagaatattataacacaa
gaaattaataagaaatcacctgatttaaaggaaaaactcaaaaagtcacaagacgagttt
atcaaaatacgggatcgttttaacacatataaaatgtttaaatccacattagcatcatta
acattagcaaaatatctcaatgcccactatgaagaagctaaaaaaaagaactgtgttctt
gattttgaagatctcatcatcaataccaatgaccttttgaaaaaacgtgatgtaagcgca
tggatacgctataaaattgatcaagaaatcaatcatatactcatcgatgaagtacaggat
actagtctcattcaatgggaagtaattcgctctctcactgaagatttttttgttggcaaa
aatacacattcaagtcctcgtacattattcgcagtaggtgacgaaaaacaatctatttat
tcttttcacggggcagaacccaaacgagttttgcgtgaaaaacgaatcaatcaaaaacgg
gctactaatgcaggacagaaattttcaataatagagcttcctttatcttttcggtcaact
gccgatattctaacggttgtggacaaggtattttctataccggaaaacgcacaaggactc
agtgaagatagcaccactactattaggcatcgttctagtcgcattggacaagttggaaca
gtacaactctgggaacaagtagtctcacaacacgattcccaatgcaatcctcaacaggaa
agttggacatcttattttgattctcttccacaagaatcttccgcttctattctagcacga
cgtattgcctatactatttcaaatatgatcggtactgatactatcttcagtaacggcaaa
aaaagggttattcaagcgaaagatatcctagtactagtacgcaagcgcaaggatacgcct
cttatcacatttctgacgcgatttcttaaaaacgattacaaaatatctgttgttggcaat
gatcgattcattctgacagatcatcttgctataaaagatttaatggcattaggacgtttt
attttatcacaagaagatgatctatcttttgtctgcatgctcaaaagccctctcttcaat
ttttccgaggatgatatatttaaaatatgcacacagcgccatgaaacagaaactgtgtac
gaatatatacaaaaatttgccaactgcggtatatccaaattccaacatgtcattaagtat
attcacgaactcattcatattgctcagttttgctctcctcacgatttttttacattaata
ttaggagcaaagaaaggaagacagcaattcatttctcgttttggaaatgaagttattgat
gtccttgatgaatttcttaactttacattacgaaatgaacaaaacagttattctagccta
caggaattaatttcagaattagaacagtatccacctactataaaaagagcacatagtgct
aatcacaatgaagttcgaattatgaccgtgcatactgcgaaaggattagaatctcctgtg
gttttccttgttgatacaggatcacaagtcttttctcataagcatattaaaaaaatgcat
attatgccttctttgaacgatgatcctggaataccaatatggattccacaatcaaaatca
cgcaataatatcgtttccgatctaattaaacatctcaaaaaatccactcaagaagaatat
aatcgtcttttatatgttggaatgacacgcgcttcggatcagttaataatttgcaagcat
tcaaatactagtaatgagaaaaaatcgaatcaaagaacttggtatgacatggtctatgat
tctttccataacgatgaaagagtaaaaaaaataaagctaacaaattctataaataaagat
gaatggatagcatatgaatggagtactcatcaccccgaaaacacccctcttgaaagggaa
gaaacgataaaacaattaatggatgagcaaaaaatcccaaaaaaacttttttctcctatt
aaaaacgatataaacgaaccgtatattctcaatccttctacgatagatacaaaaggtaaa
acgaatctagaatcattattatctgataatcaaactttcaatcgtggattgattatccat
aaattattacaagtgatttttacacttcctgaacacaaacgaaaaaattttataacttca
tactgtacaaaaaatgcgaagttatggcccgcaaaagagtataaaaatttattgttatct
attacacgccttttagagaatcccatgatgactacagctatgtcttgtgattcttattca
gaagtttctgtatctggaaaaataaattgtccaaaaaaggatattataatctctggacgt
attgatcagatatcaatctcgcaacaaaatatttttatttttgaatacaaaactcatcat
catgttcctcaagaaattgagcatattccatatactcatatcgcacaactttccatatat
gaaaaaatactcaaggattcatatcctaataagtccttagtatgtttactgatttatgtt
tcggagccaaaagtatttataattcctcaaaacaaattaaataaagcttttgcagaaata
agtacaaagataccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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