KEGG   Loxodonta africana (African savanna elephant): 100666339
Entry
100666339         CDS       T04351                                 
Symbol
COLEC12
Name
(RefSeq) collectin-12
  KO
K10062  collectin sub-family member 12
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100666339 (COLEC12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lav04131]
    100666339 (COLEC12)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:lav04091]
    100666339 (COLEC12)
Membrane trafficking [BR:lav04131]
 Endocytosis
  Phagocytosis
   Opsonins
    100666339 (COLEC12)
Lectins [BR:lav04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Scavenger receptor with a CTLD (SRCL)
    100666339 (COLEC12)
SSDB
Motif
Pfam: Lectin_C Collagen Filament KxDL Fez1 SepF MscS_porin Alpha-2-MRAP_C
Other DBs
NCBI-GeneID: 100666339
NCBI-ProteinID: XP_010585424
Position
Unknown
AA seq 724 aa
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYVLCALLTITVAILGYK
VVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQ
QLREITEKTSKNKDTLEKLQASGEALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNI
TIVSQANEQNLKDLQDLHKDAENRTTIKFSQLEERFQLFETDIVNIISNISYTAHHLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDMMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPVGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGLPGPKDPPVLSRPRRSCLPHWKNFTDKC
YYFSVEKEIFDDAKLFCEDKSSHLVYINTREEQQWIKKQIVGKDSHWIGLTDSEHENDWK
WLDGTSPEYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDINNFICERVRETVL
PSAL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaaagacgactttgcagaggaggaggaggtgcagtccttcggttacaagaggtttggt
attcaggaaggaacacagtgtaccaaatgtaaaaataactgggcactgaagttttcgatc
atattactatatgttttatgtgccttgctaacaatcacagtagccattttgggatacaaa
gttgtagagaaaatggacaatgtcacaggtggcatggagacatctcgccaaacctatgat
gataaactcacagcagtggaaagcgacctgaaaaaattaggggaccaaactgggaagaaa
gcgataagcaccaactcagaactttccaccttcagatcagacattctggatctacgtcaa
caacttcgtgagatcacagaaaaaaccagcaagaacaaagatacattggagaagttacag
gcaagtggggaggcactggtggacaggcagagtcaactaaaagaaaccttggagaataac
tccttcctcatcaccactgtaaacaaaaccctgcaggcatataatggctatgtcactaat
ctgcaacaagataccagtgtgctccaaggcaatctacagaaccaaatgtattctcataac
gtggtcattatgaacctcaacaacctgaacctgacccaggtacagcagaggaacctaatc
actaatctgcagcggtctgtggatgacaccagccaggctatccagcgaatcaagaacgac
ttccaaaatctgcagcaggttttccttcaagccaagaaggacactgattggttgaaggag
aaagtgcaaagcttgcagactctggctgccaacaattctgccttggccaaagccaacaat
gacaccctggaggacatgaacagccagctcagctcattcacaggtcagatggacaacatc
accattgtctcacaagccaacgagcagaacctgaaagacctgcaggacttacacaaggat
gcggagaacaggacaaccataaagttcagccaactggaggagcgcttccagctcttcgaa
acggatattgtgaacattattagcaacatcagttacacagcccaccacctgcggacgctg
accagcaacctgaatgaagtcaggaccacttgcacggataccctaaccaaacacacggat
gatctgacctccttgaataatacattggccaacatccgtttggattctgtttctctcagg
atgcaacaagatatgatgaggtcaaggttagacactgaagtggccaacttatcagtaatt
atggaagaaatgaagttggtggactccaagcatggtcagctcatcaagaattttacaata
ctacaaggtcctcctggccccaggggtcccaaaggtgacagaggatcccagggaccccct
ggcccaactggcaacaaaggacagaaaggagagaagggggagcctggtccgccaggccca
gctggcgagagaggcccagtcggacctgccggcccccctggagagcgcggcgggaaaggc
tccaagggctcacagggccccaaagggtcccgcgggtcccccgggaagcccggcccccag
ggccccagtggggatccaggccccccaggcccaccaggcaaggacggactccctggcccc
cagggccctcctggtttccagggcctgcagggcaccgtgggggagcctggggtgcctgga
cccagaggactgccaggcttgccgggggtgcctggtctgcccggccctaaagatccccct
gtactctccaggcccagaagaagttgccttcctcactggaagaacttcacagacaaatgc
tactacttttcggttgagaaagaaatttttgatgatgccaaacttttttgtgaagacaag
tcttcgcatctcgtctacataaacacgagagaggaacagcaatggataaaaaagcagata
gtggggaaagatagccactggattggcctcacggactcagagcatgaaaatgactggaag
tggctagacgggacgtctccagagtataaaaattggaaagctggacagccagataactgg
ggccatggtcatgggccaggagaagactgtgctgggttgatttatgctgggcagtggaac
gatttccagtgtgaagacatcaataacttcatttgcgaaagagtcagggagacagtgcta
ccatctgcattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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