KEGG   Loxodonta africana (African savanna elephant): 100677554
Entry
100677554         CDS       T04351                                 
Symbol
EMG1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100677554 (EMG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lav03009]
    100677554 (EMG1)
Enzymes [BR:lav01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     100677554 (EMG1)
Ribosome biogenesis [BR:lav03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100677554 (EMG1)
SSDB
Motif
Pfam: EMG1 TetR_C_43
Other DBs
NCBI-GeneID: 100677554
NCBI-ProteinID: XP_003410709
UniProt: G3SNC9
Position
Unknown
AA seq 244 aa
MAAPSAEFQLRERRGGEQERGWDPVAPKRPRLGAGSKIGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFST
QVVSDVRELVPSSDPIVFVVGAFAHGKVNVEYTEKMVSISNYPLSAALTCAKLTTAFEEV
WGVI
NT seq 735 nt   +upstreamnt  +downstreamnt
atggctgcgcccagtgctgaattccagcttcgtgagcggcgcggtggagagcaggaacgg
ggctgggatcctgtggctcccaagcggccccgactcggggcgggaagcaagattggaggc
cgtaggctcattgtggtgctggaaggggccagtctggagacagtcaaggtagggaagact
tacgagctactcaactgtgacaagcacaagtctatgctgttgaagaacggacgggaccct
ggggaagtgagaccagacatagcccaccagagtttactcatgctgatggacagtcctctg
aaccgagctggcttgctacaagtttacatccatacccagaagaatgtgctgattgaagtg
aacccccagactcgaattcccagaacttttgaccgcttttgtggcctcatggttcagctt
ttacacaaactcagcgttcgagcagctgatggcccccagaagctgttgaaggtaattaag
aatccagtgtcagatcacttcccggttggatgtatgaaaattggcacttctttttccact
caagtcgttagcgatgtacgagagttggtgcccagcagtgaccctattgtttttgtggtg
ggggcctttgcccatggcaaggtcaatgtggaatatacagagaagatggtgtccatcagc
aactaccccctttctgcggccctcacttgtgcaaaactgaccacagcctttgaagaagta
tggggggtcatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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