KEGG   Lelliottia amnigena: A8A57_12345
Entry
A8A57_12345       CDS       T04400                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
laz  Lelliottia amnigena
Brite
KEGG Orthology (KO) [BR:laz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:laz03016]
    A8A57_12345
Enzymes [BR:laz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     A8A57_12345
Transfer RNA biogenesis [BR:laz03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    A8A57_12345
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ANG93145
Position
complement(2643252..2644376)
AA seq 374 aa
MNYQMITTNDELATLCDVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKKVSLIDPLGI
TDWAPMRALLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSGRPLSWGFAA
MVEEYTGLALDKSESRTDWLARPLTERQLDYAAADVFYLLPIAGQLMKEAQEAGRLDAAL
NECQMTQQRRQEVLDPADAWREITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSIGLSGSEIRYHGKTLLALVAKAQEIPEENLPEPLVNLMDM
PGYRKAFKEIKALVQEVAVESKLSPELLASRRQINQLLNWHWKIKDTGLPELMAGWRGEL
MADRLNTLLNAYPR
NT seq 1125 nt   +upstreamnt  +downstreamnt
ttgaattaccagatgatcacgaccaacgacgagctggcaacgctttgcgatgtcacgcgg
gactttcctgccattgccctggacaccgagtttgtccgcacgcgcacctactatccgcag
ctgggattgatccagatgtatgatggcaaaaaagtatcgctgatcgatcctctcggcatt
accgactgggcaccgatgcgtgcgctactgctggatactgccgtgacgaagtatcttcat
gcaggtagtgaagatctggaagtgtttctcaacacctttggcatcatgccgcagccgctg
attgatacccagattcttgccgcgttcagcggtcgcccgctatcctggggttttgctgcg
atggtggaagagtacaccggtctggcgctggataagagtgaatcccgtaccgactggctg
gcgcgcccgttaacggaacgccagctcgactatgcggcagcagacgtattttaccttctg
ccgattgccgggcagctgatgaaagaagcgcaagaggcgggccgactggacgcggcgctc
aatgagtgtcagatgactcagcagcgccgtcaggaagtgctcgaccctgccgacgcctgg
cgtgaaatcaccaatgcctggcaacttcgcacgcgacagcttgcctgcctgcagctgctt
gccgactggcgtctgcgcaaggcgcgtgaacgcgatctggcggtcaactttgtcgtcaga
gaggagcacctgtgggcggtcgcgcgctacatgccgggtagtctgggcgagctggacagc
attggtctgtcgggaagtgagatccgttaccacggtaaaacgctgctcgcgctggtggcc
aaagcgcaggaaatccccgaagagaacctgcccgaaccgctggttaacctgatggacatg
cccggctaccgtaaagcgttcaaagagatcaaagcgctggtgcaggaggtcgcggttgag
agcaaactcagcccggagctgcttgcatcacgtcgtcaaatcaaccagctcttaaactgg
cactggaagattaaagacaccgggctaccggaactgatggcgggctggcgcggggaattg
atggccgatcgcctgaatacgctgctgaacgcttatccgcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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