KEGG   Laccaria bicolor: LACBIDRAFT_184877
Entry
LACBIDRAFT_184877 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
lbc  Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbc03009]
    LACBIDRAFT_184877
Enzymes [BR:lbc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     LACBIDRAFT_184877
Ribosome biogenesis [BR:lbc03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   LACBIDRAFT_184877
SSDB
Motif
Pfam: Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like Fibrillarin
Other DBs
NCBI-GeneID: 6076485
NCBI-ProteinID: XP_001880897
JGI: 184877
UniProt: B0D9Z7
AA seq 471 aa
MNFYFEAAKTLDRLDAKQGSIKGVIATLPENNRKRTAALVIETLKFKSVLSDVIRESKLM
KEERKLTSINLALVLVHDLLLSRGIQAGDGPIKQAVLRHKTRLHGELQKIKIKRGATSSQ
DLGLTSTTANIPRYARVNTSLWSIDEAIKYFVSQGYSFINSFSSLNHLANSKGFQKDAHI
PNLLAFSPNAALQDDPAYNSGKIILQDKASCFPAVVLSPPSEDNSVVIDATAAPGNKTSH
LSALMGNKGTLYAFERDRKRFSTLKMMIGKAACKNVTPVNTDFLTVDPSDPKYLPVTHIL
LDPSCSGSGIVNRLDHLLEGEPESEKSQHERLDKLAAFQLLMIKHAMRFPNVKKIVYSTC
SIHASENEHVVRDALSSDEAKAGSFSIASRNEVLPDWPRRGFAEEMNSTDAASALVRCLP
GEDATNGFFVSCFVRDQNITLKRKQDLVSEIESSPRKGKKKRRKKTEQCDA
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgaacttttatttcgaagctgccaaaacgttggatcgtctcgatgcaaaacaaggttcg
ataaagggtgtaattgctacacttccagagaacaataggaagaggactgccgccctcgtc
atcgagacgttgaaattcaaatccgttctatcggatgtgattcgggaatcaaagctcatg
aaagaagagcggaagttgacttcaataaatcttgccttggttctggttcacgacttgctc
ctgtctcgaggcatccaagcaggtgacggtcctatcaagcaggctgtgcttcgtcacaaa
acccgactgcacggtgaacttcaaaagattaagattaagcgcggtgcgacgtccagccag
gatcttggtctaacaagtacaacagccaacataccgcggtatgcgcgagtgaacacctcc
ctttggtcaatcgatgaagccatcaaatatttcgtctcgcaagggtactccttcattaat
tcattctcatctctgaatcatcttgccaacagcaaagggttccaaaaagatgctcatata
ccaaatcttcttgccttttcgcccaatgccgctcttcaagacgatccagcttacaattct
ggtaaaattatcttacaagataaagcgtcgtgctttcctgctgtcgttctttcgccccca
tcggaagacaacagcgtggtcattgatgccacagctgccccgggcaataagacctcacac
ctgagcgcacttatgggtaataaaggaacgctctatgcctttgaacgcgatcgaaagcgt
ttttcaaccctgaaaatgatgattggaaaagcggcctgcaagaatgtcacacctgtgaac
acagacttcctgacagtcgatccttctgacccaaaataccttccagtcacacatatcttg
ctggatccatcctgtagtggttcgggcatcgtgaaccgacttgatcatctgctcgaggga
gagcctgaaagtgagaaatcgcaacatgagcgtcttgacaagctagcggcttttcagttg
ctgatgataaaacatgcaatgaggttccccaacgtgaagaaaatcgtgtattcaacgtgc
agcatccatgcttctgaaaacgagcatgtggtccgcgatgctctcagctccgacgaggct
aaggccggatctttctcaatcgcctcccgaaatgaggtgctacccgactggcctcgaaga
ggttttgccgaagaaatgaactcgactgatgctgcctctgcgttggtgcgatgcttacca
ggagaagatgccacgaatggattttttgtgtcctgctttgtacgagaccaaaatatcaca
ctaaagcggaaacaagatctggtctccgaaatcgagtcaagtccgcgcaagggcaagaag
aaacggaggaagaagacagagcagtgcgatgcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system