KEGG   Laccaria bicolor: LACBIDRAFT_297651
Entry
LACBIDRAFT_297651 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
lbc  Laccaria bicolor
Pathway
lbc03030  DNA replication
lbc03410  Base excision repair
lbc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LACBIDRAFT_297651
   03410 Base excision repair
    LACBIDRAFT_297651
   03450 Non-homologous end-joining
    LACBIDRAFT_297651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbc03032]
    LACBIDRAFT_297651
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_297651
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lbc04147]
    LACBIDRAFT_297651
DNA replication proteins [BR:lbc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LACBIDRAFT_297651
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LACBIDRAFT_297651
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LACBIDRAFT_297651
Exosome [BR:lbc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LACBIDRAFT_297651
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 6076868
NCBI-ProteinID: XP_001881107
JGI: 297651
UniProt: B0DBP7
AA seq 555 aa
MGVQGLTPFLQKTFPDVIQQLPDRLRALAGKKIVIDGTLITQRLHFAQAPHPYRHIIGWY
RIAREVEESGVSAICVFDGKERNAAKAREVQRRRDVRRLATSRGTLENDRFKRLQGLKSA
LNSLHGLDVVERQGVSALLQRIESENPVEDPSEFFQEQRTVTRASEVPQESNLQTVTRKE
SPPSPSTPLHTELSISEIMSDDGPSIQRPITPISPTVINIQDREFPTALEPPSSSISQDL
TNDVETQLASLYLSYKDSVSKLASLPTPLESETSEAEEAAVEQVMTKTQYQLAIDEGELW
QNLTLSPCALPDLLNDDKIFVSSLDTLMEKSCLISESYQRRINVPTAQTYDECKEILQAM
GVPCVESTGAFEAEALAAAMVLNGLADYVVSEDTDVLIYEAPMIRNISNQKDPLTIVSGA
HVRTTLELTRESFVDFALLLGTDFSQRIKNVGPARAYRFIKEYGTIERIIETQTKYPPKI
STKAYLDQVKTARRVFRTLPPVPQLELLHQDKKDEASINLIFQRYGLGRYLMVTDDWDYE
EALAGNYFDDNPSVL
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgggggtacagggtctgacacccttccttcaaaagacgttcccagatgtaatacaacaa
ttacctgatcgtctgcgagctcttgccggtaagaaaattgtcatagatggaaccctcatc
actcaacgcctccacttcgctcaggcccctcacccataccgacatattataggctggtat
aggatagccagggaggtggaggagagcggtgtttctgcgatatgtgtgtttgatggcaaa
gaacgcaatgctgcgaaagcacgcgaagttcaacgaagacgcgacgttagaagactcgct
acctctcgggggactttggaaaacgataggttcaagcgccttcaaggtctcaaatctgct
ctcaatagtttgcatggattagatgtcgttgagagacaaggagtctcggctcttctccag
cgaattgaatcggagaaccccgttgaggatccctcagaatttttccaagaacaacggacc
gttactcgtgcttccgaggtccctcaggagagcaatttacaaacggttactagaaaggag
tcgccaccttcaccttcaactccgctccacacggagttgtcaatttcagaaataatgagc
gacgatggcccgtcaatacaacgtcccataacaccaatatcaccgaccgtgataaacatc
caagatcgagaatttcctaccgctctcgaaccgccgtcctcatcgatttcgcaagatctg
acaaatgatgtggaaacccaattggcgtcgctttatctcagctacaaggacagtgtctca
aaactagcatccttgcctacacccttggaatcagaaacatcagaggccgaagaggcagca
gtagagcaagtcatgacgaaaacccaataccagttggccatcgatgagggagagttgtgg
caaaatctcacattgtctccttgtgcccttcctgacctcttgaatgacgacaaaattttt
gtcagctctttggacactctgatggaaaagagttgtctcatatcggaatcctatcaacgg
cgtatcaacgtgcctactgcccaaacctatgacgaatgcaaagaaatcctccaagcaatg
ggtgttccctgtgtcgagtctactggtgcgtttgaggccgaagctttggcagctgccatg
gtgttaaacggcctggccgactacgtcgtgagcgaagatacggacgtgttaatctacgag
gctccaatgattcgcaacattagtaatcagaaagacccactcaccatcgtctctggcgcg
cacgttcgcacgacgcttgaattgacccgcgaatccttcgttgactttgccctccttttg
gggacagacttctcccagcggatcaagaatgtagggccagcacgcgcttatagattcatc
aaagaatatgggaccatcgagcgaataattgagactcaaaccaagtatcctccaaaaatc
tccaccaaagcgtatctcgaccaagttaaaacggcgcgaagggtattccgaacgcttcct
cccgtgccccagctcgaactgctccatcaagacaaaaaggatgaagcttctatcaacctc
atctttcagcgttatggccttggaagatatttgatggttactgatgattgggactatgaa
gaagctttggctggcaattactttgacgataatcctagcgtattatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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