KEGG   Laccaria bicolor: LACBIDRAFT_312780
Entry
LACBIDRAFT_312780 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lbc  Laccaria bicolor
Pathway
lbc03030  DNA replication
lbc03410  Base excision repair
lbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LACBIDRAFT_312780
   03410 Base excision repair
    LACBIDRAFT_312780
   03420 Nucleotide excision repair
    LACBIDRAFT_312780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbc03032]
    LACBIDRAFT_312780
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_312780
Enzymes [BR:lbc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LACBIDRAFT_312780
DNA replication proteins [BR:lbc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    LACBIDRAFT_312780
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      LACBIDRAFT_312780
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Toxin_28 IntS14_b-barrel DUF4484
Other DBs
NCBI-GeneID: 6084009
NCBI-ProteinID: XP_001888410
JGI: 312780
UniProt: B0DWP2
AA seq 2229 aa
MAPGRGTFGLSSARGRGRGNFRANYRGGSWRGRGRGRGGSKATGDAVPIREDDGTQLAER
FERAALNDEVDEKLGFGRIQEGVRKEGWLVNMHPTLVKDPDWPSGKAAVDFYFIQDDGGM
FKCTLQYEPYFCIACKSGTEASVEEWLKKKYEGLICRISREKKEDLKVPNHLMGHRRLFL
QLCFHNISDLLTVRRDILPLAQANSAKRDAVDAYAEVIRETAAMDIEMEDEAWATSVQPG
RGGGGRDSDPREGIIDIREYDIPYYLRVAIDNDIRVGLWYAVTFTAGHPSFCHIAERVKR
ADPVVMAYDIETTKAPLKFPDQAIDQVMMISYMVDGQGYLITNREIVSEDIEDFEYTPRE
GYEGPFIIFNEKDEAATIKRFFSHIQDVKPTVMATFNGDFFDFPFLDARSKVNGIDMFLE
TGFAKDAEDEYKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTYKLGYNPIELDPELMTP
YALEQPQALAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLLM
VEAYRGHIIMPNRHEDAHGSTYEGHLLASETYVGGHVEALEAGVFRSDIATDFKIVPAAV
QQLMDDLDAALTFCITEESKCSLDDVTNYEEVKAEIKAALEVMRDNPKRVDNPLIYHLDV
AAMYPNIMLSNRLQPDSMVDESVCAVCDYNRPGKTCDRRLEWAWRGEFFPAHRDEFNMIK
HALNQESFPPKRPGGPQRRFPDLNPTEQTALLHKRLGDYSRKVYKKTKDTKVENREAIVC
QRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLDTFVGEGRSITEVDEAKKMIVLYDSLQL
AHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARALVEQIGRPLELDTDGIWC
MLPGVFPENFKFKLTNGKNIGFSYPCTMLNHLVHAKFTNHQYHDLDPDTGEYVIHSENSI
FFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLIKIFQSQI
FEKFLLGTTTQECYAAVAQVADQWLDVLYSQAESLGDDELVELIAENRSMSKTLAEYGSQ
KSTSISTAKRLAEFLGDQMVKDKGLACKFIISAKPMGAPVTERAIPVAIFSAEESVKRTY
LRRWLKDNGLVTFDLRSILDWNYYIERLGSVIQKLITIPAAMQKVSNPVPRVRHPDWLFR
RVAGAVDKFKQNKLTDFFRQKGEEGDEGEETQPADMEDFGLEPRQVIRPGFSFVKRGFVR
EESPEDVTDKPLPNPTVNYSAWIKAMRPRWKKKQEARYGGGTVIPSMFQGTRVRSNHRWD
IVQLRPSKVPGRFMLWLQVDSELLAVPLRVPREFYIHLKKPAENIFQTEYYSCEKVTRNL
PHDLPCINLYKIIVREEVYQKIQEHFVDLTNDPNVDGVFEQQVPLVIRAVLKLGKTCNTD
NSSLTLNRARQVGFDLNQLDRCLTSSSRQKYLDKGKLGKYLFLYHACSANAPLHVFAVFM
PGGEVRLHIVDPATNRQPIARLNSVYTEILEKRRQMYGPSVSITYPTAPKFNTAYHSNDT
TALKAVSRELGLFEDKSFIVVISSSKDQSYFDRLVPKLAKFPVLCMSQAKGPHTLDIFPW
HSHLAQKMLNRYLSLGLWLDRMIDLAEYYDVPVGHIEGDQPLMLSDISFARRLVQQDIVL
WWSPGDQPDLGGIEHDRRPTEDLPKTDFLSAGVYSNVCLEITVRNLAVNSILQSVMVNEL
EGSGGATAFDSVSHTLDEYASGETQRDLTLGESQVSAQTFGIMKNMLKSWLVDKIQNIEN
PANLALDHFWRWITSSASHLYDQSIHRFVHGLMRKTFIQLLAEFKRLGSVVVYADFSTIL
LATSKPPGTAHAYATYITTAVTSHELFQHIYLNTERFYDFLVCMDRANLGGIVCEDPLAL
EPPEELAMEMRWNIEQFLPPAIQGDFSMIIQYFIIELYRIKQKLNLTSKTPLRVLQNDAP
DATQRDAAKANEIELISEFIARRLTRKMLKVVANIHDRQREYQMLEEPSGEFSFPVLPGS
YLHMSNPTLEFTKFACAVFALAKEYRNEVGILKRNLLELVGVREFAGEATFRNPCEPLKL
ANVPCRHCDVLRDFDFCRDPELLPNNVDINPRWLCNHCGGEYDRVAIEFMLIEMTRALER
NFAQQDLRCGKCQQIQSDNVSRYCRCSGSYQFTISKADMRRKLRTIVNVAREYNLPRLKE
CSQTLLGNW
NT seq 6690 nt   +upstreamnt  +downstreamnt
atggcgccaggacgcggcacattcggtctctcctcagcgcgcggtagaggccgaggtaac
tttcgtgcaaactaccgtggtggttcatggcgtggtcgcggcagaggacgcggcggctca
aaggcgacgggggacgctgtacccattcgcgaagacgacggtacgcagcttgctgagagg
ttcgagagggctgcgttgaatgatgaggttgatgagaagcttgggtttgggaggatacag
gagggggtgaggaaggaggggtggcttgttaatatgcatcctacgcttgtgaaggatccg
gattggccttctggaaaagcggcggttgatttttattttattcaagatgatggggggatg
tttaaatgtactttgcagtacgaaccgtacttttgcatcgcgtgcaagtctggtacagaa
gcttctgttgaagaatggctgaagaagaagtacgaaggcctgatttgtcgtatttcacga
gagaagaaagaggaccttaaagtgcccaaccacctcatgggccaccgtcgacttttcctc
cagttatgtttccacaatatatcggacctcctcaccgtccgacgcgacatcctccccctc
gcccaggcgaatagcgccaaacgagacgcggtcgacgcgtatgcagaggtcatccgtgag
actgctgctatggatattgagatggaagacgaggcctgggcgacgagtgttcaaccaggg
cgaggtggtggtggtagggactctgatcctcgggagggcatcattgatatccgggagtac
gacattccatattacctgcgcgtggccatcgacaacgatattcgtgtgggtttgtggtac
gctgtgacgttcaccgctggacatccttctttctgccatattgcggaaagggtcaaacgt
gcggacccggttgttatggcgtacgatatagagacgacgaaggctcctctcaagttcccg
gaccaggctattgatcaggtcatgatgatctcgtatatggtggatgggcagggctatttg
attacgaatagggagattgttagtgaggatattgaagatttcgagtataccccgagagag
gggtatgagggtccttttattatttttaatgagaaagacgaggctgcaactataaagcgc
tttttctcgcatatacaagacgtaaaaccgaccgttatggctactttcaacggcgacttt
ttcgattttcctttcctcgatgcccggtccaaggtgaacggcattgacatgttccttgaa
acagggtttgccaaggacgcagaagacgagtacaagagcaggacgtgtgttcatatggac
tgtttccgttgggtcaaacgtgattcatacttgcctcaaggaagccaaggtttgaaggct
gttacaacgtacaagttggggtataatccgattgaacttgatcccgagttgatgactcca
tatgcattggaacaacctcaagcccttgcacaatactcagtttccgatgctgttgcgacc
tattatctttatatgaaatacgtgcatccgttcattttctcgttgtgtaacattatccct
ctcaaccctgacgaggttttgcggaagggaagtggaacattgtgcgaaacgttgttgatg
gtggaagcttaccgaggacacatcatcatgccaaacagacacgaagatgcacacggcagt
acgtacgaaggtcatttgcttgcctctgagacgtatgttggaggccatgtcgaggcactt
gaggctggcgttttccggagtgacattgcgactgactttaagatagtcccagctgcggta
caacagctgatggacgaccttgatgccgctcttactttctgcatcacggaagaatcaaag
tgctcgttggacgacgttaccaattacgaagaagtcaaggccgagatcaaagcagccctc
gaagtaatgcgagataatcccaagcgtgtcgacaatcccctcatctaccatttggacgtc
gcggccatgtaccccaacatcatgttgtcgaaccgactccagcctgattctatggttgac
gaatctgtctgcgctgtttgtgattacaaccgacctggaaagacgtgtgatcgtcgactc
gaatgggcctggcgaggggaattcttccccgcccaccgagacgagtttaatatgataaag
catgctttgaatcaggagtcctttccccccaagcgtcctggaggacctcaacggcggttc
cctgacttgaatccaacagagcagacggctctcctgcataaacgacttggcgattattct
cgcaaggtgtacaagaagacgaaggacacaaaggtcgagaaccgggaggcgatagtgtgt
cagagggagaaccccttttacgttgacaccgttcgcaggttcagagatcgtcggtatgaa
tacaagggtctgcataagacgtggaagaagaatttggacacgtttgtgggtgaaggccgg
tccattacggaggttgacgaggcgaagaagatgatcgtcctttacgattcgctgcagctt
gcgcacaaatgtatattgaactctttttacggatacgtgatgcgcaagggtgcacggtgg
cattctatggagatggctgggatcacttgtttgacgggagctactatcattcagatggct
cgtgctctcgtagagcagattggtcgaccattggagctggacacggatgggatttggtgc
atgcttcctggcgtgttcccggagaatttcaagttcaagcttacgaatgggaagaacatt
gggttttcatatccttgtaccatgctgaaccacttggttcatgcaaagttcaccaaccac
caataccacgatctcgaccctgacacgggcgaatacgtcatccacagcgagaactctatc
ttttttgagctggatggcccttacaaggccatgattcttccatcttcgaaggaggaggac
aagctgcttaagaagaggtatgctgtcttcaacgacgatgggtccttggcagagctaaag
ggattcgaggtgaagagacgtggagaactccaactcatcaaaatcttccaatctcagatc
tttgaaaagttccttctcggtaccaccacccaggaatgctacgccgctgtggctcaagta
gccgaccagtggctcgatgttctgtattctcaagcagagagtctgggcgacgacgaattg
gtggaacttattgccgaaaacagaagcatgtccaaaactttggcagagtatggcagtcaa
aagtcgacctctattagcactgcgaaacgacttgctgagtttttgggtgaccagatggtc
aaggataagggtttggcttgtaaattcatcatttcggccaaaccgatgggtgctccagtc
acggagagggccattccagtcgcgatcttttctgcagaagagagcgtgaaacgaacgtac
cttcgcagatggttgaaggacaatggcctggtcacgtttgaccttcgctcgatcctagac
tggaactattacattgaacggttgggttccgttattcagaagctcatcactatcccagca
gctatgcagaaggtttcaaaccctgtaccgcgcgtccgccatccagactggcttttccgt
cgagttgctggtgcagtcgacaagtttaaacaaaacaagctcactgacttcttccgccaa
aaaggagaagagggggacgaaggcgaggaaactcaacctgctgacatggaagatttcggt
ttggagccccgccaagtcatccggcctgggttctcctttgtcaagcgtggttttgttcgt
gaagaatcaccagaggacgtcactgacaaaccgcttccgaatcccactgtcaactactct
gcatggatcaaagcgatgcgtccaaggtggaagaaaaagcaggaagcacggtatggtgga
gggacagtcatcccgtcgatgttccaggggacgagggtccggagtaatcatcgttgggat
attgttcaacttcgaccaagcaaggttccaggacggtttatgctctggcttcaagtggac
tcggagcttcttgcggtcccccttcgtgtgccacgggaattctacattcatctcaaaaaa
ccggctgaaaatatttttcaaaccgaatattactcgtgcgaaaaagtcactcgaaatttg
ccccatgatcttccatgcatcaatctttacaagatcattgtacgggaagaagtatatcag
aaaattcaggaacacttcgttgatcttacaaatgaccccaatgtcgatggcgtctttgag
caacaagtaccactcgtaatccgagccgttctgaagctgggcaagacgtgcaacacagac
aattcgagtcttaccctcaatcgcgcccgacaagttggttttgatttgaaccaactagac
cgctgtttgacctcttcgtcacgccaaaaatacctcgacaagggcaaattaggcaaatac
ctgtttttataccacgcatgctctgcaaacgcccctcttcacgttttcgcggtcttcatg
ccggggggcgaggtcaggctgcatatcgttgaccctgcgaccaatcgacagccaattgct
cgtctaaattccgtctacactgaaattctggaaaagagacggcaaatgtacggcccaagt
gtttccatcacgtaccccacagccccaaagttcaacactgcatatcattctaacgacaca
acggctttaaaggctgtctcccgcgagctgggacttttcgaagacaaatcgtttatcgtc
gttatctcgtcaagcaaagaccagtcctattttgaccggttggttccaaagctggccaaa
ttccctgtgttgtgcatgtcgcaggcgaagggtcctcacacccttgacatcttcccttgg
cattctcacttggcccagaagatgttgaaccgatatctgtcgcttggtctttggcttgat
cggatgattgaccttgctgagtattatgatgttcccgttggacacatcgaaggagatcaa
cctctcatgttgtcagacatcagctttgctcgccgtttggtgcagcaggatattgtcctg
tggtggtcgccgggagaccaaccagatttgggaggaattgagcacgaccgacggccaacc
gaagatcttccaaaaactgatttcctttcagcaggcgtttattcgaacgtttgcttagag
attacagtcagaaatcttgcagtcaattccatattgcagtccgtcatggtcaacgaactt
gagggcagcggaggggcgactgcctttgattcggtatcccatacgttagacgagtacgct
agtggcgaaacgcaacgagaccttacgcttggcgagtcgcaggtttctgcacagacattt
ggtatcatgaaaaacatgctcaagtcttggctcgttgataagatccaaaacatagaaaat
cccgccaatcttgccctcgaccatttctggagatggataacgtccagcgcttcgcatttg
tatgaccagagcatacaccgcttcgtacatggcctcatgcgaaagacattcattcaactc
ctggccgagttcaaacgccttggctccgtagtggtttacgctgacttcagtaccatcctc
ttggccacgtcaaagcctccaggcacggcccacgcctacgcaacatacataacgacagcg
gttacatcccatgaactgttccaacacatatacttgaacacggagaggttctacgatttc
cttgtttgcatggatcgcgccaatctcggtggtatcgtatgtgaagacccgctagcgctt
gaaccgccagaagaactcgccatggagatgcgttggaatattgaacagttcctgcctcct
gcaattcaaggcgatttcagcatgataattcaatacttcatcattgagctctatcggatc
aaacaaaagctcaatctgacgtcaaaaactccattgcgagttcttcaaaacgatgctcca
gatgcgacacagcgcgacgcagccaaagcaaacgagattgagctaatctccgaattcatt
gcccgacgtttaacacgaaagatgctcaaggtggttgcgaacattcacgatcggcagcgg
gagtatcaaatgctggaagaacctagcggggaattcagttttccggtcctccctggatca
tatctccacatgtcgaatcctacccttgagtttaccaaattcgcctgtgccgtcttcgcc
ttggccaaggagtatcggaacgaagttggaattttgaaacgaaacttgttggagcttgtg
ggcgttcgagaatttgcgggcgaagcaacatttcgaaatccgtgcgagccacttaagctg
gcgaatgtgccttgccgtcactgcgacgttctacgagacttcgacttctgtcgtgatccg
gaactcctcccgaacaatgtggatataaatccaagatggctttgtaaccactgcgggggc
gaatacgaccgcgttgccatcgagttcatgctgattgaaatgacgagagccttggaacga
aacttcgcgcaacaagacttgcgatgtggaaaatgtcaacagatccaatcggacaatgtt
tctcgatattgccgatgctctggctcttaccagtttactatttctaaagctgacatgcgc
cgaaaattaaggacgattgtcaacgttgctcgcgagtataacttgccgcggttgaaggaa
tgctcacaaaccttgctgggcaattggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (64)   

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