KEGG T01113: LBRM_26

Leishmania braziliensis: LBRM_26_1370

Entry

LBRM_26_1370 CDS T01113

Definition

putative DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

lbz Leishmania braziliensis

Pathway

lbz03410	Base excision repair
lbz03420	Nucleotide excision repair
lbz03430	Mismatch repair
lbz03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:lbz03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:lbz03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:lbz03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:lbz03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2 Zn-ribbon_8 DUF4379

Other DBs

NCBI-GI:

154339353

NCBI-GeneID:

5416489

UniProt:

A4HEZ0

Position

26:439572..441005

AA seq 477 aa
MSKLFGARGRRTLQQKRVYDQLKNTTIQDAFPHIAACWVGPCWGSVMQTPCNVSPVCMKM
AVWRCSSCLQEFEMVVGHFVDEGGVCPHCHNPQKRLDNVTLRNAQGELVIKKPQYIKAPR
MIHSNYRSVLFTNPHWESLNIQPMLAQRWELVVDELTKSSNGENGTTPDKHLLLASPKID
GIRCMIGYNQKLQEVQFFSRGGIVLECCHGLVPQLLPLFKEDPTLMLDGELFAPECNFEQ
LNGLVRRLNKKSSPKVMEAQARLLEYFAFDIMYSAQLSSPSAPFDERYQLLKKLIPVCGA
KRISNYIHDDAKKKVIRAKHGSVATAANGQAVKIYHVPAAQVHPSDMKDVLDEACSQGFE
GVMIRLPKFPYEHGKRSFGLLKYKQMHDAEFKIVGFVPGEGKFKGALGAFICETKDGKLF
NTPPKVPYKRRIELWAHRKEFLSKYLTVQYQELSSQNVPRFPIAKAVRGSEDRQDWL

NT seq 1434 nt +upstreamnt +downstreamnt
atgagtaagctctttggggcccgcggtcgtcgcacactacaacagaagcgcgtctacgat
caactgaaaaataccaccattcaggatgcatttcctcacatcgccgcctgctgggtgggg
ccgtgctggggcagcgtgatgcagacgccatgcaacgtatcccccgtgtgcatgaagatg
gcggtgtggcgctgctccagctgcttgcaggagttcgagatggtagtggggcacttcgtt
gacgagggcggcgtgtgcccgcattgtcataacccgcagaagaggctggacaacgtgacg
ctgcgcaacgcgcagggggagctggtgatcaagaaaccccaatacataaaagcgccgcgc
atgattcactcgaactaccgtagcgtgctcttcaccaacccacactgggagtcgctgaac
attcagcccatgcttgctcagcgctgggagcttgtagtagacgagctcacgaagagtagc
aatggcgagaatggcaccactcccgacaagcatctgcttctcgcctcccccaagatcgac
ggcatccgctgtatgatcgggtacaaccagaagcttcaggaagttcagttcttttcccga
ggcggtatcgttctcgagtgctgtcacggcctcgtcccgcagctactgccgctctttaag
gaggacccaacgctcatgctggacggcgagctcttcgcaccagaatgcaactttgagcag
ctcaacgggctcgtgcgccgactcaacaagaagtccagcccaaaagtcatggaggcgcag
gcacggctgctggagtacttcgccttcgacatcatgtatagtgcgcagctctcgtccccg
tcagcccctttcgacgagcgttatcagctgctcaagaagctcatccccgtctgcggagcg
aagcggattagcaactacatccacgacgacgcgaagaagaaggtaatccgcgcgaagcac
ggcagtgtggccacggcagcaaacggtcaggccgtgaagatttaccatgtccctgccgca
caggtccacccaagcgatatgaaggatgtactggacgaagcgtgctcgcagggcttcgag
ggtgtcatgatccgacttcccaagttcccctacgaacacggcaagcgcagctttgggttg
ctcaagtacaagcagatgcacgacgcagagtttaagattgtaggcttcgtgcccggagaa
ggcaagtttaagggtgctcttggcgcctttatctgcgagaccaaggacggcaaactattc
aacacaccacccaaggtcccctacaagcgccgcatcgagctgtgggcgcatcgcaaggaa
ttcctcagcaagtacctgacggtccagtaccaggaactctcctcgcagaatgtgccgcgc
ttcccaatcgccaaggccgtacgcggtagtgaggataggcaagattggctgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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