KEGG   Leishmania braziliensis: LBRM_35_3240
Entry
LBRM_35_3240      CDS       T01113                                 
Name
(RefSeq) putative exosome complex exonuclease rrp41
  KO
K11600  exosome complex component RRP41
Organism
lbz  Leishmania braziliensis
Pathway
lbz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LBRM_35_3240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbz03019]
    LBRM_35_3240
Messenger RNA biogenesis [BR:lbz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LBRM_35_3240
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     LBRM_35_3240
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF1623
Other DBs
NCBI-GeneID: 5419919
NCBI-ProteinID: XP_001568943
UniProt: A4HPG8 A0A3P3ZIP9
Position
36:complement(1232945..1233685)
AA seq 246 aa
MSRQKEYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESL
HKQEAKHDKVLVTCEVAVAAFAGESRRNPQRRSKLSEDIDAAVVQVARSVILLSQYPNSQ
IHIYIEVLQQDGNEKVACINAACLALVDANVAMRDVVCCISVGLLDEHMLIDLANDELRS
QCPVIVAAFTGHDTQNIIWLETTSRLPPDSVARLLKCAEQGAQELFETTIRKSLEEHAKK
ILTLQI
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtctcgccaaaaggagtacgtcagtccagcaggtcttcgcctggacggccgtcgtcca
ctggaggcacggcgcatggacatcgtattcggcacgctttccgcctgtgacggcagttgc
gacatcacagttgggcaatcgaaggtgtgtgcatccatctttgggccgcgagaatcactt
cacaagcaagaggcaaagcacgataaggtgcttgtcacgtgcgaggtggctgttgccgct
ttcgctggagaaagccgtcgcaatccgcagcggcgtagcaagctctcggaggacatcgac
gctgccgtcgttcaagtggcccgctccgtcatcctcctctcccagtaccccaactcgcag
attcacatttacatcgaggtccttcaacaggatgggaacgagaaggtcgcgtgcatcaat
gcagcatgcctcgccctggtcgacgcaaacgttgccatgcgggacgtggtgtgttgcatc
agtgtagggcttctggacgagcacatgctgatagacctggcaaacgacgagctgcgctct
cagtgcccagtgattgtagcagcgttcacgggacacgacacgcagaacatcatctggctg
gagacaacttcgcggctacctcccgactcggtggcgcggctgctcaagtgcgcggagcag
ggcgcccaggagctctttgagacaacaatccgaaagtcgctggaggaacacgcaaagaag
atcttgacactacaaatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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