KEGG T00407: LSEI

Lacticaseibacillus paracasei ATCC 334: LSEI_1576

Entry

LSEI_1576         CDS       T00407

Name

(GenBank) Transcription elongation factor

K02600

transcription termination/antitermination protein NusA

Organism

lca Lacticaseibacillus paracasei ATCC 334

Brite

KEGG Orthology (KO) [BR:lca00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lca03021]
    LSEI_1576
   03009 Ribosome biogenesis [BR:lca03009]
    LSEI_1576
Transcription machinery [BR:lca03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     LSEI_1576
Ribosome biogenesis [BR:lca03009]
Prokaryotic type
  rRNA transcription factors
   LSEI_1576

SSDB

Motif

Pfam:

NusA_N KH_5 S1 KH_1 KH_2 DHHA1

Other DBs

NCBI-ProteinID:

ABJ70350

UniProt:

Q038M2

Position

complement(1570670..1571923)

AA seq 417 aa
MSKEMIQALDALEQEKGVKKEVVIEALEAALVSAYKRNYNQAQNVDVEFDPKQGDIHIYA
VKEVTDEVFDSRLEVSLKEALAINKAYEIGDQIKFEVTPKDFGRIAAQTAKQVIMQRVRE
AERSIVYDEYSQYEDEILQGVVERRDNRFIYVNLGKIEAVLGRQDQMPNEKYEAHDRIKV
YVTKVENTSKGPQVFVSRTHPGLVKRLFEQEVPEIFDGTVEIVNIAREAGDRTKIAVRST
NDAVDAVGTTVGPRGARVQAVVNELSGENMDVVQWEEDPADYIANALNPAQVIAVQFNDE
ANDRSATVIVPDYQLSLAIGKKGQNARLAAKLTGYKIDIKPESEVEFVDDDELPEAEAEA
AAETNDNADAATDAETTPDSDAAAADDADDAKTASDAPDSADQAPVTPSATDHPAQA

NT seq 1254 nt +upstreamnt +downstreamnt
atgtcaaaggaaatgatccaagcacttgacgctcttgagcaagaaaagggtgtcaaaaaa
gaggtcgtgattgaagctttggaagccgctttggtttctgcttacaagcgcaattacaac
caagcgcaaaatgtggacgtcgaatttgatcctaagcaaggtgacattcacatttatgcg
gtgaaggaagttactgacgaagttttcgattcacggctggaagtcagcttgaaagaagcg
ctggcgattaacaaggcttatgaaatcggtgaccaaatcaaatttgaggtcacaccaaaa
gacttcgggcgcatcgctgcacaaactgctaagcaggttattatgcagcgggttcgtgaa
gctgaacgcagtattgtttatgacgaatattcacagtatgaagatgagattcttcaaggg
gtcgttgagcgccgagataatcggttcatctacgtcaacttgggtaaaatcgaagcggtc
ttaggccgtcaagatcagatgcctaatgagaagtatgaagcccatgatcgcatcaaggtt
tatgtgaccaaggttgaaaacacgagcaagggtccgcaagttttcgttagtcgaacacat
ccgggtctggttaagcggttgtttgaacaggaagtgccagaaatttttgacggcacggta
gaaattgtcaacattgctcgtgaagcaggcgatcggactaaaatcgctgtgcgatcaacc
aatgacgctgttgatgctgtcggcacgactgttggtccgcgtggtgcgcgcgttcaagcc
gtcgttaacgagctttcaggtgagaacatggatgttgtgcaatgggaggaagacccagcg
gattacattgccaacgctttgaatccggctcaggttatcgcggttcaattcaatgatgag
gccaatgatcgttccgctactgtgattgtgccggattaccagttgtccttggcaattggt
aaaaaggggcaaaatgcgcgacttgctgccaagctgaccggctataagattgacatcaag
cctgaatctgaagttgaattcgttgatgatgatgaattgcctgaagcagaggctgaagcg
gctgctgaaactaacgacaacgcagatgcagcaactgacgctgagacaacgcctgacagt
gatgccgctgcagcagatgatgccgacgacgccaaaaccgcctcagatgcaccagattca
gctgatcaagcgcctgtaacgccgagtgcaaccgatcatccggcgcaagcttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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