KEGG   Lates calcarifer (barramundi perch): 108875089
Entry
108875089         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: grainyhead-like protein 3 homolog
  KO
K09275  transcription factor CP2 and related proteins
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108875089
Transcription factors [BR:lcf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Grainyhead
    108875089
SSDB
Motif
Pfam: CP2
Other DBs
NCBI-GeneID: 108875089
NCBI-ProteinID: XP_050934204
Position
LG19:14123891..14132559
AA seq 570 aa
MTKETETLGLVFQSENFNYNHYTNYIMDSWSYLDGPVPEQNHSKPRLHPGDDLAAITMLY
EQCKKEQKLAACNRGNNLYKTERTPANANELASLEASANVMKILSESIPTSHPQEVLGSK
QNTSLPISVPTTSDTYTTLTSVVADTYDKQELNIIFDSLLQKWPEPAVFSDPNNEALPYS
DPFSEEQHSPVYSGSYTGSPPQRFRNDFQFSLGAPPASPYKSSELPMVYLNKGQFYPITL
QGVDSSACLTATKVKTVVMAVFENDKSPEMQLRFWNHWHARQPTVKQRVIDIADYKEVFS
GISNIEEVAFNALSFVWNPSEEAKVYIGINSLSTDFSSQKGVKGLPLNLQIDTYDFSSGT
NQLIHRAACQIKIFCDKGAERKMRDEERKRSKRRGKNSNDANTNKSLVSSSMGSDCTFFQ
TLDDHVTQPVLFIPETHLSSLQRMATPMDEIERSSMKRLYPDRDQNSSPPSKQARKEDPQ
RVLLYVRTGAEEVFDALMLSTPTLSGLQEAISEKYGMQKDTIGKIYKKCKRGIFVNMDDN
IIEHYTNQSAFLIEMSEVVSGQIQVTLVEV
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaccaaagagactgagactctgggactggtttttcagagtgagaacttcaactataac
cattatacaaactacatcatggactcctggtcctacctggacggccccgtccccgagcag
aaccactccaaacccagacttcacccaggagacgacctggcagcaataaccatgctttac
gaacagtgcaagaaagaacagaagcttgctgcctgcaaccgtggcaataacctctacaaa
acagaaaggacgccagccaatgccaatgaacttgcctcactggaggcgtccgccaatgtc
atgaagatcctctctgagagcattcccaccagccatccccaggaagttttgggatccaag
cagaacacctccctgcccatctctgtccccaccacctctgacacctacaccaccctgacc
agcgttgtggccgacacttacgacaaacaggagctcaacatcatcttcgattccctgctg
cagaagtggccggagcccgctgttttcagcgaccctaacaatgaggctcttccctacagc
gatcccttctctgaagaacagcacagccccgtctactccggctcctacaccggctccccg
ccacagagattcaggaacgacttccagttttccctgggagctcccccggcttccccttac
aagtccagtgagctgcccatggtctacctgaacaagggacagttctaccccatcactctc
cagggagtggacagcagtgcctgcctcactgccaccaaagtcaaaacggtggtgatggct
gtgtttgaaaatgacaagagcccagaaatgcagctccgcttttggaatcactggcatgcg
cggcagccgaccgtcaagcagagggtcattgacattgcagactacaaagaagtgttcagc
ggcattagcaacatagaggaggtggctttcaacgctctctcctttgtgtggaaccccagc
gaagaagccaaggtgtacattggcatcaactccctgagcacagacttctcctctcagaag
ggagtgaaaggcctgcctctaaacctgcagattgacacttatgacttcagctcaggaacc
aaccagctcatacacagggccgcctgccagatcaagattttctgcgataagggtgcagag
aggaagatgcgcgatgaggagaggaagagaagcaagaggaggggaaagaacagtaacgat
gctaacaccaacaagtctttagtgagcagctccatgggcagtgactgcaccttcttccag
actctggatgaccacgtcacccagccagttctctttattccagaaacacacctctccagc
ttacagcgcatggccactcccatggatgagatcgaaaggagttctatgaagaggttgtat
ccagacagagatcagaacagctctccacccagcaagcaagcccgcaaagaagacccacag
agagtgctgttgtatgtgaggacaggcgcagaggaggtgtttgatgcgctcatgctcagc
acgccaacactgtcgggcctacaggaagctatttcagaaaagtacggcatgcaaaaagac
accattgggaaaatctacaaaaaatgcaagagagggatctttgtcaacatggacgacaac
atcatcgaacactacaccaaccagtcagcctttctcattgagatgtcagaggtggtctcc
ggtcagatccaggtcaccctcgttgaagtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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