KEGG   Lates calcarifer (barramundi perch): 108875541
Entry
108875541         CDS       T04895                                 
Name
(RefSeq) unconventional myosin-Vb
  KO
K10357  myosin V
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108875541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108875541
   04131 Membrane trafficking [BR:lcf04131]
    108875541
   03029 Mitochondrial biogenesis [BR:lcf03029]
    108875541
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108875541
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     108875541
   mRNA cycle factors
    P-body specific factors
     108875541
Membrane trafficking [BR:lcf04131]
 Others
  Actin-binding proteins
   Myosins
    108875541
Mitochondrial biogenesis [BR:lcf03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    108875541
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     108875541
SSDB
Motif
Pfam: Myosin_head DIL IQ Myosin_N Ac76 AAA_22 AAA_16 nSTAND3
Other DBs
NCBI-GeneID: 108875541
NCBI-ProteinID: XP_050924994
Position
Unknown
AA seq 1830 aa
MSVNELYTKFTRVWIPDPEDVWRAAEISRDYKEGEPVLHLKLEDETPLEYPIGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTTAEDFTYTSLGENIFIEGVN
DAEDFEKTREAFTLLGIKESSQINIFRVIASILHLGNIEICPERDGESCHVSRDDLHLKH
FCRLLGVELQQMEHWLCHRKLATASETYVKTMSSKQAANARDALAKHIYARMFDWIVEHI
NMSLQTSSKQHSFIGVLDIYGFETFELNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHGSSAHFQK
PRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHDKDDPPP
SKSSRVNVRAAKSVPKVPNKDHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDYKEA
FSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKSDMMSSDKKLVCK
NLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRAACIKIQTTVRGWLQRVRYRK
IRKSAITLQRYGRGYLARSVLTTCRCCRPGTAEYLRLTRAALICQKQYRMVRDRRAYLRV
RQAVVTIQAYTRGMFTRRIYWEFLLHHKAMIIQRSVRGWLQRRKFRRARNAAIIIQCAFR
RLRAKRQLKQLKIEARSAEHLKKLNTGMENKIVQLQRKMDDQSKEYKAQNEQLQMVNASL
GSEVTKLQKQLEVIRGQQGDGGQLTSLQDELERLREELQEAQAERKRMEEEHSTEKLSLQ
QRVEELERENSLLKSEKEEMNQRILQQSKSSEADGGGASQREESLQSELDAERQRYQNLL
KEFSRLEQRYDNLKEELSLSKFQPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDSIQLV
EEMGVEKAAMDISLFMKLQKRVRELEQERKRLQISVDKMEELAKRRGSEAKSPTSEQDTA
DLAYNSLKRQELESENKKLKNDLNELRKTVAERASQNSSSNELQDGYNLLLSQLKAANEE
LDARKEEVLILRTQILSTAQLQEKNQHIESNNVPEVNDSKEPVDKDEALKAYHGLTESKK
LLEAQLQTQSRQHKDELEALHTQIELLKDDIEKKQEILNYTMSLSPEAQVEYSVQQEITR
LTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQAAAVTGRSRPELSRQVTVQR
KEKDFEGMLEYYKEDEALLIKTLITDVKPSTVSATVPCLPAYILFMCIRHADYINDDQKV
ESLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEVFMTQNTAKQNEHC
LKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNR
SSSMDTDAGGPTSYTLEALIRQLGQFHGTMRDHGLDPEIVGQVVRQLFHCINAVTLNNLL
LRKDVCSWSTGMQLRYNTSQMEEWLRGNNLYQSKAAATLEPIIQAAQLLQVKKKTSQDAE
AICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDPPQLLVDTKHTF
PVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq 5493 nt   +upstreamnt  +downstreamnt
atgtctgtgaacgagctgtacacaaagttcacccgggtctggatcccggaccctgaggat
gtgtggagagctgcagagatcagcagagactataaggagggagagccggttctccacctc
aaactggaggatgagacgcctctggagtatcctattggtccgaagagtaaccccctccct
ttcctgcgtaaccctgacatcctggtgggggagaacgacctcactgctctcagttacctg
catgaacctgccgtcctgcacaacctcagagttcgcttcctggagtccaaccacatctac
acctactgcggcatcgtcctggtcgccatcaacccgtacgagcagctgcagatttatgga
gaggaggtcatcaacgcctacagcggtcagaacatgggggacatggaccctcacatcttc
gctgtggctgaggaggcttataaacagatggccagagacgagaggaatcagtcgatcatc
gtcagcggagaatcaggagcaggaaagacggtttctgcaaagtacgccatgaggttcttc
gccaccgtgggaggttcagctaacgacaccaacgtggaggagaaggttctggcctccagt
cccatcatggaggcgatcggaaacgcaaaaaccactcggaacgacaacagcagtcgcttc
gggaagtacatccagatcggtttcagccgacactaccacatcatcggggccaacatgagg
acctacctgctggagaagtccagggtggttttccaggctgaagacgagaggaattatcac
atcttctatcaactctgtgcctccgcctcgctgccagagttcaaagacctgagcctcacc
actgcagaggacttcacctacacgtctttaggggagaacatcttcattgagggcgtgaac
gacgctgaggactttgagaagaccagagaggccttcactctgctgggtataaaggagagc
agtcagatcaacatcttcagagtcatcgcctccatccttcacctgggaaacattgagatc
tgtcctgagagagacggagagtcctgtcacgtctcgagagacgacctccacctgaagcac
ttctgccggctgctgggggtggagctgcagcagatggagcactggctctgtcacaggaag
ctggccaccgcctccgagacctacgtcaagaccatgtccagcaaacaggcggccaacgcc
cgcgacgccctcgccaaacacatctacgcccgcatgttcgactggatcgtggagcacatc
aacatgtcgctgcagacgtcctccaaacagcactccttcatcggggtcctggacatctac
gggttcgagacgttcgagttgaacagttttgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagtttaactctcatgtgtttaaactggagcaggaggagtacatgaag
gagcagatcccctggactctgattgacttctacgacaaccagccctgtatagacctgatc
gaggctcggctcgggatcctggacctgctggacgaggagtgtaaagtgccgaagggaaca
gatcagaactgggcccagaaactctacaagcagcacggcagcagcgctcacttccagaaa
cctcgtatgtccaacacctccttcatcatcatacactttgctgacaaggtggagtatcag
tgtgaagggtttctggagaagaacagagacaccgtctacgaggagcagatcaacatcctg
aaggccagtcagtttcagctcgtagcagatctgtttcatgacaaagacgaccctccgccc
tctaagagctccagagtgaacgtgcgagcggcgaagtcggttcctaaagtcccgaacaaa
gatcacaggaagacagtgggacaccagttccgcagctccctgcacctcctcatggagact
ctgaacgccaccaccccccactacgtccgctgcatcaaacccaacgactacaaagaggcc
ttctcgttcgactcgaggcgagcggtgcagcagctcagagcctgtggagtcctggagacg
atccggatcagtgctgctgggtacccgtccaggtggacgtatccagacttcttcaacagg
taccgagtgttgatgaagaaatctgacatgatgtcatcagacaagaagctggtctgtaaa
aacctgctggagactctgatcaaggaacccgacatgttccagttcgggaaaacgaagatc
ttcttccgggcggggcaggtggcgtacctggagaagctccggaccgacaagttccgcgca
gcctgcatcaagatccagacgacggtgagaggctggctccagagagtccggtaccgcaag
atccgcaagtccgccatcaccctgcagagatacggccgaggatacctggcccgcagtgtg
ttgaccacctgtcgttgttgtcgtccaggtactgctgagtacctgcgtctgacccgagcc
gccctcatctgtcagaaacagtaccgcatggtgagagatcgacgggcgtacctgagagtg
agacaggctgtggtcaccatccaggcctacaccagagggatgttcacccgcaggatctac
tgggagttcctcctccaccacaaagccatgatcatccagaggagcgtgcgcggctggctg
cagaggaggaagttcagacgggccagaaacgccgccatcatcatccagtgtgcgttcaga
cgcctgcgagcaaaacgccaactcaaacagctgaagatcgaagctcggtcggcagaacac
ctgaagaagctcaacacggggatggagaacaagatcgtccagctgcagaggaagatggac
gaccagtctaaagaatacaaagctcagaacgagcagctgcagatggtcaatgccagtctg
ggctcggaggtgaccaaactgcagaagcagctggaggtgatccggggtcagcagggtgac
ggaggtcagctgacgtctctgcaggacgagctggagaggctgagggaggagctgcaggag
gcgcaggccgagaggaagaggatggaggaggagcacagcaccgagaaactcagcctccaa
cagagggtggaggagctggagagagaaaactctctgctgaagagcgagaaagaagaaatg
aaccagaggatccttcaacagtcgaagagctcagaggcagacggcggcggagcgtctcag
agggaggagtctctccagagtgagctggacgctgagaggcagcgataccagaacctgctc
aaagagttctccagactggagcagagatacgacaacctgaaggaggagctgtctctgagc
aagttccagcccggccacaggaggaacccgtccaatcagagcagcctggagtcggactcc
aactacccgtctgtctccacctcagaggtcggagacactgaggactccatccagctggtg
gaggagatgggggtggagaaggcagcgatggacatcagtctgttcatgaagctgcagaaa
cgtgtcagagagctggagcaggagaggaagaggctgcagatcagcgtggacaagatggag
gagctcgccaagcgcaggggctcagaggccaagagtcccacctccgaacaggacactgca
gatctggcctacaacagcctcaagagacaggagctggagtcagagaacaagaaactgaag
aacgacctgaacgagctgaggaagacggtggccgagcgggcgtctcagaacagctcgtcc
aacgagctgcaggacggatacaacctgctgctgagtcagctcaaagccgccaatgaggag
ctggacgcccgcaaggaggaagtcctgatcctcaggactcagatcctcagcacggcccag
ctgcaggagaagaaccagcacatagagagtaataatgttcctgaggtgaacgacagtaaa
gagcctgtggacaaagacgaggctctgaaggcctatcacggactgactgagtccaagaag
ctgttggaggcccagctgcagactcagtccagacaacacaaagacgaactagaggctctt
cacactcagatcgagctgctgaaggacgacatcgagaagaagcaggagatcctcaactac
accatgtccctgtctcctgaggctcaggtggagtacagcgtccagcaggagatcacccgg
ctcaccaacgacaacctggacctcaaggagctggtggagaaactggagaagaacgagagg
aagctgaagaagcagctgaggatctacatgaagaaagtccaggagttagaagcctctcag
gctgcagccgtcaccggcaggtccagacctgagctcagccggcaggtcaccgtccagagg
aaggagaaggactttgaggggatgttggagtactacaaggaggacgaggccctgctcatc
aagaccctgatcactgacgtgaagcccagcacggtgtcggcgaccgtcccctgcctcccg
gcttacatcctcttcatgtgcatccgccacgccgactatatcaacgacgaccagaaggtg
gagtctcttctcacctccaccatcaacgccatcaagaaggtcctgaagaaaaacaacgat
gactttgagatgacgtcgttctggttggccaacaccagccgcctgctgcactgtctgaag
cagtacagcggagacgaggtgtttatgactcagaacacggccaaacagaacgaacactgt
ctgaagaacttcgacctggccgagtaccgacaggtgctgagcgacctctccatccagatc
taccagcagctcattaaggtggcggagggcatcatccagcccatgatagtgtcggccatg
ttggagagcgagagcatccccagcctggcgggcgtgaagccgatgggctacaggaaccga
tcgtccagcatggacacggacgccggcggccccaccagctacaccctggaggccctgatc
agacagctgggccagttccacggcaccatgagggaccacggtctggacccagagatcgtg
ggtcaggtggtccgacagctgttccactgcatcaacgccgtcaccctcaacaacctgctg
ctgcgcaaagacgtctgctcctggagcaccggcatgcagctcaggtacaacaccagtcag
atggaggagtggctgagaggaaacaacctgtatcagagtaaagctgcagccacgctggag
ccgatcattcaggccgctcagctgctgcaggtcaagaagaagacgtctcaggacgcagag
gccatctgctcgctctgcaccgccctcaccatgcaacagattgtgaagatcctgaacctc
tacacgcctctgaacgagtttgaggaaagagtcactgtgtccttcatcagaaacatccag
aaccggctccaggagaggaacgatcctcctcagctcctggtcgacaccaaacacaccttc
cctgtcctcttcccctacaccccctccgccctgagcctggagacgctgcacatccccgcc
tccctcggcctcgacttcctcatcagagtctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (65)   

Download RDF
DBGET integrated database retrieval system