KEGG   Lates calcarifer (barramundi perch): 108884920
Entry
108884920         CDS       T04895                                 
Symbol
pex5lb
Name
(RefSeq) PEX5-related protein isoform X1
  KO
K13342  peroxin-5
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    108884920 (pex5lb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108884920 (pex5lb)
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108884920 (pex5lb)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_17 TPR_8 TPR_11 TPR_19 TPR_16 TPR_14 TPR_12 TPR_7 TPR_9 TPR_20 ANAPC3 TPR_15
Other DBs
NCBI-GeneID: 108884920
NCBI-ProteinID: XP_018534526
Position
LG4:483483..508324
AA seq 618 aa
MYQVQGKGERVVAMVLKELPGKKASSEGNPLLTVTTKLVGEQQESRPLLSPSIDDFLSES
RSDAASARPLTSNTAVLSTALDLVDLSEPGESSGGSNGGSSGSSGGGNNKDRRRSPLRRK
GSSRSPRRQGRPEETELIQVEVEHLPASPRTPERISLDSVSLPSPLDKWEEVNLDVEDGG
RRRRYEKRCTSHHSSSELLWSAEFKTDPLTKNSFDVRSFDDLDFISSTQDCGASRQRRRT
RSLLARNESLEDEFVRAKAAVESDTEFWDKMQAEWEELARRNWLEESEGQCPIPPSISPA
EKGYYFNTNNPYRDWPNAFAEGQEKAREGDLNAAVLLLEAAILQDPQDSEAWQVLGTTQA
ENENEQAAIVSLQRCLELHPNNLLALMALAVSFTNSGMQREACDALRRWIGHNPRYKHLV
LDQRSPLQGSPATPRRGPHTSAPPRCELQDVLLLFQDAALLNLDCVDPDLQTGLGVLFNL
SSDFDKAVEAFTAALSVRPQDYLLWNRLGATLANGNRSEEAVEAYTRALELQPGFIRSRY
NLGISCINLGAHREAVSNFLTALNQQRRSQRCSHQQMSANIWAALRIAVSLMDRPELFQA
ANVGDLDLLMRAFDVDDA
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtaccaggtccaggggaaaggggaaagggtcgttgccatggtgctgaaggagcttcct
ggtaaaaaggcctcctctgaaggaaaccccctcctcaccgtgacaaccaagctggtcggg
gagcagcaggagagccgccccctgctgagcccctccatcgatgacttcctgtcagagagt
cgcagcgacgccgcctccgcccgacccctcacctccaacacagcagttctgtccacagct
ctggacctggtggacctcagcgagccaggggagagcagtgggggcagtaatggtggcagc
agcggcagcagtggtggtggcaataacaaggaccggaggaggagtcctctgaggaggaag
ggcagctccaggagtcctcgacgccaggggagacctgaggagacggagctgatccaggtg
gaggtggagcacctgcccgccagtcccagaacacctgagaggatctctcttgactcagtg
agtctgccgtctcctctggacaaatgggaggaggtgaacctggacgtggaggacggagga
cgcaggaggagatacgagaagagatgcacctcccaccactcctccagtgaactgctctgg
tctgcagagtttaaaactgatccactgaccaagaactccttcgacgtccgcagcttcgac
gacctcgacttcatatcatcgacacaggactgcggggcgtccagacagcgcagacggact
cggtccctgctcgccagaaacgagtctctggaggacgagtttgtcagagcgaaggctgca
gtggagtcggacacggagttctgggataagatgcaggcggagtgggaggagctcgctcgg
aggaactggctggaggagtctgagggtcagtgtccgatcccgccctccatctcacctgcg
gagaagggttactacttcaacaccaacaacccgtacagagactggcccaacgccttcgcc
gaggggcaggagaaagcccgggaaggagacctgaacgccgctgtcctgctgctggaggcc
gccatcttacaggacccgcaggactctgaggcctggcaggttctggggacaactcaggcc
gagaatgagaacgagcaggccgccatcgtgtccctgcagaggtgtctggagctccacccc
aacaacctgctggctctgatggcgctcgccgtcagcttcaccaacagcggcatgcagcgg
gaggcctgtgacgccctgcgccgctggatcggccacaaccccagatacaaacacctggtc
ctggaccagaggagcccgttacagggctccccggccacgccccgcaggggcccccacacc
tccgcaccacccaggtgtgagttgcaggacgtgctgcttctcttccaggacgcggctctg
ttgaatctggactgtgtggatccggacctgcagaccggactgggagtcctcttcaacctc
agctcagactttgacaaagctgtggaggcttttactgcagcgctgtccgtcagaccacag
gactacctgctgtggaaccggctgggagcgacgctggccaatgggaaccgcagcgaggag
gcggtggaggcgtacaccagagctctggagctgcagcccggattcatccggtccagatac
aacctgggaatcagctgcatcaacctgggagctcacagggaggcggttagtaacttcctg
acggctctgaaccagcagaggcggagccagcgctgcagccatcagcagatgtcagccaac
atctgggccgccctgcgcatcgctgtctccttgatggaccgacccgagctgttccaggcc
gccaacgtcggggacctggacctgctgatgagggcgttcgacgtggacgatgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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