KEGG   Lates calcarifer (barramundi perch): 108886293
Entry
108886293         CDS       T04895                                 
Symbol
marchf5
Name
(RefSeq) E3 ubiquitin-protein ligase MARCH5 isoform X1
  KO
K10660  E3 ubiquitin-protein ligase MARCH5 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    108886293 (marchf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108886293 (marchf5)
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108886293 (marchf5)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   March proteins
    108886293 (marchf5)
SSDB
Motif
Pfam: RINGv DUF2517 zf-RING_2 FANCL_C zf-RING_4
Other DBs
NCBI-GeneID: 108886293
NCBI-ProteinID: XP_050932523
Position
LG16_LG22:1406134..1422105
AA seq 273 aa
MLKASSLSCWVCFATDEDDRTAEWVRPCHCRGSTKWVHQACLQRWVDEKQRGNSTARVAC
PQCNAEYLIVFPKLGPVVYVLDLADRLISKAGPFAAAGIMVGSIYWTAVTYGAVTVMQVV
GHKEGLDVMERADPLFLLIGLPTIPVMLILGKMIRWEDYVLRLWRKYSNKLQILNSIFPG
IGCPVPRIPAEASPLADHVSATRILCGALVFPTIATIVGKLMFSSVNSNLQRTILGGIAF
VAIKGAFKVYFKQQQYLRQAHRKILNFPEQEEA
NT seq 822 nt   +upstreamnt  +downstreamnt
atgctaaaggcttcttccttgagctgctgggtgtgcttcgccacggacgaggacgaccgc
acggcggagtgggtgcgtccgtgtcactgccgcggctccaccaagtgggtccaccaggcc
tgcctgcagcgctgggtggacgagaagcagcgggggaacagcacggcgcgcgtcgcctgc
ccacaatgcaatgcagaatacctcatcgtcttccccaaactgggtcccgtggtctacgtg
ctggacctggctgaccgcctcatctctaaggccggaccgttcgcggctgctggcatcatg
gtgggctccatctactggactgctgtcacctacggcgccgtcactgtcatgcaggtggtc
ggccataaggagggtttggatgttatggagcgagccgaccctctgttcctgctcatcggc
ctgcccaccatccccgtcatgctgatcctcggaaagatgatccgctgggaggactacgtc
ctgcgtctgtggaggaagtactccaacaaactgcagatactcaacagcatcttcccaggg
attggttgcccagttcctcggatcccagcagaggccagccccctggcggaccacgtgtcg
gccacacggatcctgtgcggcgccctggtcttccccaccatcgccaccattgtggggaag
ctcatgttcagcagcgttaactccaacctgcagaggaccatcctgggaggtatcgccttc
gtcgccatcaagggagcgtttaaggtgtacttcaaacagcagcagtacctgaggcaagcc
caccgcaagatcctcaacttcccggagcaggaggaagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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