KEGG   Lates calcarifer (barramundi perch): 108887855
Entry
108887855         CDS       T04895                                 
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7
  KO
K04809  nicotinic acetylcholine receptor alpha-7
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04020  Calcium signaling pathway
lcf04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    108887855
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108887855
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108887855
Ion channels [BR:lcf04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   108887855
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb SUR7 DUF2417
Other DBs
NCBI-GeneID: 108887855
NCBI-ProteinID: XP_018538998
Position
LG2:8701830..8720940
AA seq 510 aa
MDLVKFLLFVAVTGCTVKVSLQGPNQHRLYDDLMANYSPLVRPVSNDSETLTVKFGLSLM
QIMDVDEKNQVLTTNIWLQLYWDDHYLRWNESDYPGVNNVRFPDDYIWKPDILLYNSADE
RFDATFHTNILVSSSGTCSYLPPGIFKSTCRIDVRWFPFDIQRCDLKFGSWTYDGWSLDL
KMLDADITGYTPNGEWDLVEVPGRKNERFYECCPEPYPDVTFTVVMRRRTLYYGLNLLIP
CVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATT
MVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEERVRSACDNN
APRSSLTSMELNASTSASQSTNGNMLYVGVRGLESIPYSTAATSPDSGVLCGRLGVRAGE
EELLLPTAHSSSLGKVEPEIAKILDEVRYIAKRFRVQDEDISVCNEWKFAAAVIDRLCLM
AFSLFTILCTIGILMSAPNFVEAISKDFFN
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggacttggtcaaatttctgcttttcgtcgcagtcaccggctgcacagtgaaagtttct
cttcaaggtccaaaccagcacagattatatgatgacctgatggccaattacagtccactg
gtgagaccagtgtccaatgactctgagacactcaccgttaagtttggcctgagcctcatg
cagatcatggacgtggatgagaagaaccaagttttaacaaccaacatttggcttcaactg
tattgggatgatcattacctccgctggaatgaatcggactatccaggtgtgaacaatgtg
agatttcctgacgattacatttggaaaccagacatcctgctctataacagtgcagatgaa
agatttgatgctactttccataccaacattttggtcagctcctctggcacctgttcctac
ctacctccagggatcttcaagagtacttgccgcatcgatgtgcgctggttcccttttgat
atccagagatgtgacctgaagtttggctcctggacatatgacggctggtctctggactta
aagatgctggatgcagatatcactggctacacgccaaatggagagtgggatcttgttgag
gttccaggacgcaagaacgagcgtttctacgaatgctgtccggagccgtaccctgatgtc
accttcaccgtggtgatgcggagacggaccctctactatggcctcaatctgctcatccca
tgtgtcctgatctccactctggctctgctcgtctttcttctgcctgctgactctggggag
aagatctcactgggcattacagtcctgctctccctgactgtcttcatgctgctagtcgca
gagattatgcctgccacatcagactctgtgcccttaatagctcagtactttgccactacc
atggtcatcgttggtctctcagtaattgctacagttctggtcttgcagtatcaccaccac
gaccctgatggaggcaagatgccgaagtggacccgtgtgatcctgctgaactggtgcgcc
tggttcctgcgcatgaagcgcccaggtgaggagcgagtgcgttcagcctgcgacaataat
gctccacggagcagcctgaccagcatggagctcaatgctagcacctccgcctcccagtcc
accaatggcaacatgctctatgttggtgtccgcggcctggagagcattccctactccaca
gctgccacctcgcctgactccggggtcctgtgtggacgcctgggtgtacgagcaggtgag
gaagagctgcttctccccacagctcatagctcctcgttggggaaagttgaaccggaaata
gccaagattctggacgaggtgcgttacattgccaaacgcttccgtgtccaagacgaggat
atctcagtgtgcaatgagtggaaatttgctgcggctgttattgataggctttgtcttatg
gctttctcgctcttcaccatcctctgcaccattgggatcctcatgtcagctcctaacttt
gttgaggcaatttccaaagattttttcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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