KEGG   Lates calcarifer (barramundi perch): 108889825
Entry
108889825         CDS       T04895                                 
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03430  Mismatch repair
lcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108889825
   03460 Fanconi anemia pathway
    108889825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108889825
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     108889825
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c Nucleo_P87
Other DBs
NCBI-GeneID: 108889825
NCBI-ProteinID: XP_018541998
Position
LG16_LG22:2239239..2244447
AA seq 736 aa
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTSIQVTVKDGGLKLLQIQD
NGTGIRKEDMDIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASAVDNIRGVFGNAVSRELIEVGCEDQKLAYKMK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSGGTEVKSS
TTAADSTERVYAHQMVRTDCRAQKLDAFLQPKEKPPPDPEPAGPSGREAATKPTGPDSVE
MDDTDDADLLEALAQQEAEEESSVSAHDVQRKRPRKEQQLDEEEEEAEVEEEEELTAAAT
PKRRVIKLTSIKELRTEITENTHKGLQEMLQKHSFVGCVNPQWTLIQHHTKLYLLNTTKL
SQELFYQILIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFL
TKKAEMLGDYFSLEIDQEGNLTGLPLLLDKYTPIMEGLPMFILRLATEVNWDSERECFRD
FSKECSMFYSIRKQYVLEAEPGEEQDGEANSWRWKVEHVIFKAFRTLFSPPKNFSEDGTV
LQIANLPDLYKVFERC
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggcgggagttatccggagactcgacgagactgttgtcaaccggattgctgcgggagaa
gttatccagcgtcctgccaacgccgtgaaagagatgattgaaaactgcttagatgccaag
tccacgagcattcaggtgacggtgaaggacggcggactgaagctccttcagatccaggac
aatggcaccggcatcaggaaagaggatatggatatcgtctgtgagcgtttcaccaccagc
aaactccagacgtttgaggatctctcagctattgcaacctacggatttagaggagaggcc
cttgcgagtatcagccatgtcgcacacgtgaccattacgacaaagacagctgatgccaaa
tgcgcctacagggccagctacagcgatggcaaactgaaaggtcctcccaaaccctgcgct
ggcaaccaggggacacagattcttgtggaggacctcttctataacgtgtccaccaggagg
aaagctttaaagagccccagtgatgagtactccaggattgtagaagtggtcagcaggtac
gccatacacaactcaggaaaaagtttttctgtgaaaaagcaaggagagactgtggcagat
gtgaggactctacccaacgcatctgcagtggataacattcgaggagtgtttggcaatgca
gtcagcagggagctgatcgaagtcggctgcgaggatcagaagcttgcgtataagatgaaa
ggctacatctccaatgcaaactactcggtcaagaaatgcatcctgatcctgttcatcaac
catcgtctggtggagtcgagcgctttgaagaaggcgatcgagacggtttacgctgcgtac
cttcccaagaacacacaccctttcctttacctcagcttagagatcgccccgcagaacgta
gacgtgaacgttcaccccacaaaacatgaggtgcatttcctgcatgaggacagcgtcatc
gagagcgttcagaagcacatcgagagcaaactgctgggctccaactcctctcgcacgtat
ttcactcaaacgttgctgccggggctgtcggtctcaggtggcactgaagtcaagtcctcc
accaccgcagctgattctactgagcgagtctacgcacatcagatggtgagaaccgactgc
cgcgctcagaagctggacgccttcctccagccgaaagaaaaaccgcctcctgaccccgaa
ccagctggacccagcggcagagaggctgcgaccaaacccaccgggcccgacagcgtggag
atggacgacacagacgatgcagatctgctggaggccctggctcagcaggaggcagaggag
gagagcagcgtcagcgctcacgatgttcagaggaagcgtccgaggaaggagcagcagctg
gacgaggaggaagaggaggctgaggtggaggaggaagaggagctgacggctgcagctacg
cccaagagacgagtcataaaactgaccagcatcaaagagctgaggactgagatcactgag
aacacgcacaaaggtcttcaggaaatgctgcagaaacactcgttcgtgggctgcgtcaac
ccccagtggactctgatccagcatcacaccaagctgtacctgctcaacaccactaagctc
agtcaggagcttttctaccagatcctcatctacgactttgggaacttcggcgtactcaga
ctgtctactccggctccgctctacgacctggccatgttggctctggactccgaggagagt
ggctggaccgaagaggatggacccaaagagggactggctcagtacatagtggacttcctg
acgaagaaagcagagatgctgggggactacttctccctggagatagaccaggagggaaat
ctgacaggactgccgctgcttctcgacaagtacacccccatcatggaaggtctccccatg
ttcatcctgcgcctggccactgaggtgaactgggacagcgagagggagtgtttcagagac
ttcagcaaggagtgcagcatgttctactccatcaggaagcagtacgtcctggaggccgag
ccgggagaggagcaggatggagaggcgaactcgtggcgttggaaagtggagcacgtcatc
ttcaaagctttccgaactctcttcagcccgccgaagaacttcagcgaggatggcacggtg
ctgcagatcgccaacttacctgacctgtataaagtgtttgagaggtgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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