KEGG   Lates calcarifer (barramundi perch): 108891504
Entry
108891504         CDS       T04895                                 
Name
(RefSeq) APOBEC1 complementation factor isoform X1
  KO
K24978  APOBEC1 complementation factor
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108891504
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     108891504
SSDB
Motif
Pfam: RRM_1 DND1_DSRM RRM_7 RRM_5 dsrm BRAP2
Other DBs
NCBI-GeneID: 108891504
NCBI-ProteinID: XP_018544179
UniProt: A0A4W6G195
Position
Unknown
AA seq 616 aa
MESNQKTNGDGVTGMQKEAALRVLMQRTGYQLRQENGQRRYGGPPPGWDGPPPERGSEIF
VGKLPRDLFEDELVPLCEKFGKIYEVRMMMDFNGNNRGYAFVTFSNKQEARAAMKQLNNY
EIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMRKVTEGVVDVIVYPSAADKSKNR
GFAFVEYESHRAAAMARRKLLPGRIQLWGHAIAVDWAEPEVEVDEDTMATVKILYVRNLM
LQTTEETIEKEFNSLKPGAVERVKKIRDYAFVHFTQREDAISAMNALNGKVVDGSPIEVT
LAKPVDKDSYVRYTRGTGGRGGSLLQTDYAAYTLGQVYDPSAAYLGAPVFYAPQAYAAIP
GQFRFPATKAHVGGRGLIRTPSVREIYMTVPVGAAGVRGLGGRGYLAYAAGGGAMGRGSG
SSGGVSYGLKADKQAEEKLYDLLPGMELTPMNPAAMSLKAAAIKPAPQVLEELCQKNNWG
QPVYQLHSAIGPDQRQLFLYKITVPALATQYPNVHPFTPAKLCAAVEEAKVHAAEHTLQT
LGLQTEGAADASCATAAAVASVAFPGYTLASPASSAVASQLKQAVSLGQDLTAYTTYEGY
PAFAVATRHTDGYGVF
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggaatccaatcagaaaacaaacggggacggagtgacggggatgcagaaggaggcggca
ctccgggtactcatgcaacgtacgggataccagctgagacaggagaacggccagcggcgg
tacggcggccccccgcccggctgggacggcccgccaccagagagaggcagcgagatcttt
gtgggcaaactaccgagagatctgtttgaagacgaactggttccgctgtgtgagaagttt
gggaagatctacgaggtgaggatgatgatggacttcaacgggaacaacagaggttacgcc
ttcgtcaccttcagcaacaaacaggaggccagagcagccatgaagcaacttaacaactat
gagatcaggaatggccgcctcctcggtgtctgtgccagtgtcgacaactgccgtctgttt
gtgggagggattcccaaaacgaagaagcgtgaggagatcctgtctgagatgaggaaggtc
accgaaggggtcgtggatgtcattgtgtacccgagtgccgccgacaagtccaagaaccga
ggctttgccttcgtcgagtacgagagtcaccgagcggctgccatggcccgccgcaaactg
ctgccaggtcgtattcagctgtggggtcatgccatcgccgtggactgggcggagccagag
gtggaggtcgatgaggataccatggcaacagtcaagatactgtatgtcaggaacctgatg
ctgcagaccacagaggagaccatcgagaaagagttcaacagcctaaaaccaggtgcagtg
gagcgagtgaagaagatcagagactacgccttcgtccatttcactcaaagagaagacgcc
atcagtgccatgaatgctctcaacggaaaggtggtagatggttctcctatcgaggtaact
ctggcaaagccggtggacaaagacagttatgttcgttacaccagagggaccggaggacga
ggaggatctctgctgcagaccgactacgccgcctacactctgggacaggtgtacgatccc
tcagcagcatatctcggggcacctgtgttttacgccccccaggcctatgctgccatacca
ggtcagtttcgtttcccagcaaccaaagctcatgttggaggtcgaggtctgatcaggacg
ccatctgtcagagaaatttacatgactgtacctgtaggggctgcgggggtgcgggggctg
ggtgggcggggctacctggcctacgccgccgggggaggagccatgggtcggggcagcggc
agtagcggcggcgtctcctatggcctgaaggcggacaagcaggcggaggagaagctgtat
gacctgctgccaggcatggagctgaccccgatgaaccctgccgccatgagcctgaaggcc
gctgccatcaaacctgcaccacaggtcctggaggagctgtgtcagaagaataactggggt
cagcctgtctatcagctccactctgccattggtccagaccagagacagctcttcctctat
aagatcacagtaccagctctggctacacagtaccccaatgtccatcccttcacccctgcc
aagctgtgtgcagctgtagaggaagctaaagtccacgcagccgagcacaccctgcagacg
ctcggcctgcagacggagggcgccgccgacgccagctgtgctactgctgccgctgtggcc
tcagtagccttcccaggttacactctggcgagcccggcgtcgtcggcggtggcctcccag
ctgaagcaggctgtatctctgggccaggacctgaccgcctacaccacctacgagggctat
cctgccttcgctgtggcgacgcgtcataccgacggatatggcgttttctag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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