KEGG   Lates calcarifer (barramundi perch): 108891535
Entry
108891535         CDS       T04895                                 
Symbol
ebf3a
Name
(RefSeq) transcription factor COE3a isoform X1
  KO
K09103  early B-cell factor
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108891535 (ebf3a)
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    108891535 (ebf3a)
SSDB
Motif
Pfam: COE1_DBD COE1_HLH TIG
Other DBs
NCBI-GeneID: 108891535
NCBI-ProteinID: XP_050923724
Position
Unknown
AA seq 585 aa
MFGIQDNLPRGATASMKEEPLAVRSWMHSAGVVDANTAAQSGVGLARAHFEKQPPSNLRK
SNFFHFVLALYDRQGQPVEIERTAYVDFVEKEKEPTGEKTNNGIHYKLQLLYSNGVRTEQ
DLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIID
RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRA
RRLDPSEGTVTGFQEAATPCIKAISPSEGWTTGGATVILIGDNFFDGLQVVFGTMLVWSE
LITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVI
PRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPS
LGNTASHSMMGVNSFSGQLAVNVSETTQGMNTRIVGYSRNTSSVSPRGYVPSSTPQQSNY
GNTVSNSMNGYGNTSMPNLGVATSPGFLNGSSANSPYGIVPSSPTMAVSNCNSSHGVFSF
SAAVKQKSAFAPVVRPPASPPPPPNCSANNANGLQAMSGLVVPPM
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgttcgggatccaggacaacctgccccgtggggccacggccagcatgaaggaggagccg
ctggcagttcgctcctggatgcactcggccggcgtggtggatgccaacacggccgctcag
agcggggtggggttagctcgcgctcactttgagaaacagcctccgtccaacctgaggaaa
tccaacttcttccacttcgtgttggcgctgtacgaccggcagggtcagcctgtggagatt
gaacgcactgcctacgtcgactttgtggagaaagagaaggagccgacgggagagaaaacc
aacaatgggattcattacaaacttcaactgctctacagcaatggagtgaggacggagcag
gacctgtacgtccgactaattgactcaatgaccaaacaggcgatcatctatgaaggtcag
gataagaacccagagatgtgccgagtcctgctcacacatgagatcatgtgcagtcgctgc
tgtgataagaagagctgtggaaacagaaacgagacgccatcagaccccgtcatcattgac
aggttcttcttgaagttcttcctgaagtgtaaccagaactgtctgaaaaatgctggaaat
ccacgagacatgaggaggtttcaggttgtggtgtctacgacagtgaacgtggacggacat
gttcttgccgtgtccgacaacatgtttgtacacaacaactccaaacatggccgccgagcc
cggagactggacccatcagaaggtacagtcacagggtttcaggaggccgccactccctgt
attaaagccatcagtcccagtgagggctggacgacgggtggagccaccgtcatcctgatc
ggagacaacttctttgacggccttcaggttgtgtttggcaccatgctggtctggagcgag
ctgatcacccctcacgctatccgggtccagactccgccccgtcacattcccggggtcgtc
gaggtcacgctgtcctacaagtccaaacagttctgtaaaggagcgccgggacgcttcgtc
tacacagcattaaatgaacccaccatagactacggtttccagaggttacagaaggtcatt
cctcgtcaccccggagacccagagagactgcccaaggaggtgttgttgaagagagcagct
gacctggtggaggcgctgtacgggatgcctcacaacaaccaggagatcatcctgaagcga
gcggccgacatcgcagaggctctctacagcgtccccaggaaccacaaccagatcccgtcg
ctaggcaacaccgcctcccacagcatgatgggagttaattccttcagcggacagctggcc
gtcaacgtctccgagacgacgcaaggtatgaacaccaggatagtcggctacagtcgtaac
accagcagcgtgtcgccgcggggatacgtccccagctccaccccccagcagagtaactac
ggcaacactgtcagcaacagcatgaatggctacggcaacaccagcatgccaaacctcggc
gtggcaacatcaccgggtttcctcaacgggtcgtctgccaactctccctacggcatcgtc
ccgtccagtccgaccatggctgtgtcgaactgtaactcctctcatggagttttctccttc
tctgccgccgtcaaacagaagagcgccttcgctcctgtcgtccggccgccggcttcacct
cctcctccacctaactgctccgccaacaatgccaacgggctgcaagccatgtccggtctc
gtcgtgccccccatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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