KEGG   Lates calcarifer (barramundi perch): 108891992
Entry
108891992         CDS       T04895                                 
Name
(RefSeq) charged multivesicular body protein 2a
  KO
K12191  charged multivesicular body protein 2A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
lcf04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108891992
  09143 Cell growth and death
   04217 Necroptosis
    108891992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108891992
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108891992
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108891992
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108891992
  Exosomal proteins of other body fluids (saliva and urine)
   108891992
  Exosomal proteins of colorectal cancer cells
   108891992
SSDB
Motif
Pfam: Snf7
Other DBs
NCBI-GeneID: 108891992
NCBI-ProteinID: XP_018544908
UniProt: A0A4W6DZ89
Position
LG23:complement(15780684..15784247)
AA seq 220 aa
MEFLFGRRKTPEEMLRQNQRALNRAMRELDRERMKLEQQEKKIIADIKKMAKQGQMDAVK
IMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLP
QIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLSDELS
NLPTPGGNLSVAGGKKAEPQAALADADADLEERLNNLRRD
NT seq 663 nt   +upstreamnt  +downstreamnt
atggagttcctgtttggaaggagaaagactccagaggagatgctgaggcagaatcagagg
gcgctcaaccgagccatgagagaactggacagagagagaatgaaactggagcaacaggag
aagaaaatcattgctgacattaagaaaatggccaaacagggacaaatggacgccgtcaag
atcatggccaaggatttggttcgtacgaggcgctacgtcaaaaagttcatcatgatgaaa
gcaaacattcaggctgtcagcctaaagatacagacactcaaatccaacaacagcatggca
caggctatgaaaggcgtcactaaagccatggccaccatgaacagacagctgaaactgcct
cagattcagaagatcatgatggagtttgaacgacagagtgaaatcatggacatgaaagag
gagatgatgaatgatgccatcgacgatgccatgggtgatgaggatgatgaggaggagagt
gatgccatcgtgtcccaagtactggacgagctgggtttgaatctgtccgacgaactgtca
aatctcccgacccctggaggaaacctgtcggtggccggaggaaagaaggccgagccccag
gccgccctcgctgacgcagatgccgatctggaggagcggctgaacaacctccggagagac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system