KEGG   Lates calcarifer (barramundi perch): 108892420
Entry
108892420         CDS       T04895                                 
Name
(RefSeq) mutS protein homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108892420
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    108892420
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_22 nSTAND3 ATPase_2 AAA_23
Other DBs
NCBI-GeneID: 108892420
NCBI-ProteinID: XP_018545467
UniProt: A0A4W6F6L3
Position
LG19:complement(11254585..11261049)
AA seq 925 aa
MYCSSTEEVKTGSDISKCGQTWRASPVDGSRLNETTSYGPLSASSGSSRQSLDEGSTSSG
HGPTQARMASGQFHRSLTLGRTNPSLLASTSDSSSFRSRGGTPRLGRTPGSAGAAGSHPA
RTPLTDHTATSCSSATATSVASVIVAVVEGRGLARGEIGMASLNLKCPELVLSQFADTGT
YAKVITKIHILVPLEILMPDTASEKGKGTKLFNLITENFPGVAFTAIQRKYFNERKGLEY
IQQLCAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVTFKGSEQTAMID
SASATNLELVVNNRDHRSEHTLLGVLNHTKTPGGARRLRSNILEPLFDVDTINIRLDAVQ
ELLQDEELFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAETKITHVIQLKHTLDMVPR
LRMVLKNCNTALLKAYSTSLEDARFDLILEQIKTVINDDTTYLKGSLNMRTQKCYAVRPN
INEFLDIARRAYTEIVDDIAGLVNQMGEKYGLPMRTSFSTARGFFIQMKLEGVVLPEGNL
PSEFIKVTKHKNNYGFTTADLMKMNDRCDEALREIFHMSYVVICQLLCTIHEHIHCLYKL
SDAVSMLDMLLSLANTCTISDYVRPEFTDTLAIKQGRHPILERIAGQQPVSNNSYISEGS
NFVIITGPNMSGKSTYLKQVAMCQIMAQIGSFVPAEYASFRVADQIFTRIGVDDDFETNC
STFMLEMKEISYIIHNVSDRSLIIIDELGRGTSAEEGIGICHSVCEFLLSLKAFTLFATH
FLELCQLESLYPNVENQHMEVQHTRSGDTGAESVLYTYLLYRGCSEERHYGLRAAEMTAL
PSGLIQEAKIIASNVSQQLLAKHHSDPETQRQRAVYHLATRLLQAARNSRLDPDSLRMYL
KGLRKQYEAELQAVWQPASVDTEEE
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgtactgtagcagcacagaggaggtgaaaaccggcagtgacatctcaaaatgtggacaa
acctggcgggcgtccccagtggacggaagtagactgaacgaaactacctcgtacggtccc
ttatcagcttcctccggttcatcccgccagagtttagatgaaggcagtacgagctccggc
catggcccaacacaggcccgaatggcctcaggtcagtttcatcgcagcttgacgttaggg
aggacaaatccatcactccttgcatctacttcagacagctcctccttccgcagccgtgga
ggaacacccagactcggaaggaccccgggatctgctggggccgcaggttcacatcctgca
cggacaccactgactgatcacaccgcaacaagttgctcctcagcaactgcaacctcggtt
gcctctgtgattgtagctgtggttgaaggccgtggtttggccaggggagagattggcatg
gccagtctcaacttgaaatgtccagagcttgtactctctcagtttgcagacactgggaca
tatgccaaggtcataaccaagattcacatcttggtgccactggaaatactgatgccagac
acagctagtgagaaggggaaagggaccaagctgttcaacctcatcactgagaacttcccg
ggtgtagctttcactgcaatacaaaggaagtattttaatgagaggaaaggactggagtac
attcagcagctgtgtgctccagaatttggcaccgtcctcatggaagtgcaagctaagtat
tattgcctagcagctgcagctgctttgctgaaatacttagagttcatccagaactctgtt
tatgctgccaagtctcttaaagtcacctttaaagggagtgaacagacagccatgattgac
tcagcatctgccactaacttggagctggtggtcaataacagagaccacaggagtgaacat
actcttttaggggtacttaaccacacaaaaacaccgggtggtgctagaagattgcgctcc
aatattctggagccactgtttgatgtggacaccatcaacatacgactggatgccgtccaa
gagctgctacaggatgaggagctcttctttggcctgaagaatgccataggtcatttcctt
gacattgaccagctgctctctgttcttgtccaaatcccaaagcaggaaacagttcaggtt
gctgaaacaaagattacacatgtcattcagctgaaacacacattggatatggtgccaagg
ttaaggatggtgttgaagaactgcaacacagctctactcaaagcttacagcacctcactg
gaagacgccaggtttgacttgatcctagagcagatcaagacagtgattaatgatgacaca
acatacctgaaggggagtctgaacatgcgcacccagaagtgttatgctgtgcgccctaac
atcaacgagttcctcgacattgcccggagagcttacaccgagatagtggatgacattgca
gggctagtgaaccagatgggggagaagtatggcttgccaatgcgtaccagcttcagcaca
gctcgagggttctttatccagatgaagcttgaaggagtggttttgcctgaaggaaatctc
ccctcagagttcatcaaggtgaccaagcacaagaacaactacggcttcaccactgcagac
ctgatgaagatgaatgaccgctgcgatgaggccctgagggagatcttccacatgtcctat
gtggtgatatgtcaactgctgtgcaccatccacgagcacatccactgcctttacaagctc
tctgatgctgtatccatgctggatatgttgctttcacttgcaaatacatgcaccatctca
gactatgtgcgtccagagttcacagacacgctggcgatcaagcagggtcgtcaccccatt
ctggagcgaatcgctggacagcagcctgtgtcgaacaatagctacatctccgagggcagc
aactttgtcatcatcactgggcccaacatgagtggcaaatccacctatctcaaacaggtg
gcgatgtgtcagatcatggctcagataggctcttttgtccctgctgagtacgcctccttt
cgtgttgctgatcagattttcaccagaattggtgtggatgatgattttgaaactaactgt
tccaccttcatgttggaaatgaaggagatctcttacataatccacaatgtaagtgacaga
tccctgatcatcatagatgagctgggacgtggtaccagtgctgaggagggcattggcatc
tgtcactcagtgtgtgagttcctccttagcctcaaggcgttcaccctgtttgccacgcac
tttcttgagctgtgccaactggagtctctttatcccaatgtggagaaccagcacatggag
gttcagcacacacgcagtggcgacactggtgctgagagcgtgttgtacacatacttgctg
tatcgtggatgctctgaggaaagacactatggtctgcgagcagcagaaatgactgccctt
ccctcaggattaatccaagaggcaaagataattgcctccaatgttagccagcagctcctg
gccaaacatcacagtgatccggaaacacagaggcagagagctgtgtaccacctggccacc
cgcctcctgcaggctgccaggaactccagactggaccctgacagcctgcgaatgtatctg
aaaggcctgaggaagcagtatgaggcagagctgcaggccgtgtggcagccagcatctgta
gatacagaggaagaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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