KEGG   Lates calcarifer (barramundi perch): 108894793
Entry
108894793         CDS       T04895                                 
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N
  KO
K13098  RNA-binding protein FUS
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03015  mRNA surveillance pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108894793 (taf15)
  09122 Translation
   03015 mRNA surveillance pathway
    108894793 (taf15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108894793 (taf15)
Spliceosome [BR:lcf03041]
 Complex A
  Other components
   Complex A specific factors
    108894793 (taf15)
SSDB
Motif
Pfam: RRM_1 zf-RanBP
Other DBs
NCBI-GeneID: 108894793
NCBI-ProteinID: XP_018548914
Position
LG21:7968664..7977010
AA seq 434 aa
MATDSGYGGSQSYGSYTGQQGGQGYGQGNGSGSYAGQSYGGFGQQGATQDGYGQSQQQSY
DNYGQESSGYGDKSSSYGQQASYGQQGSYGQQGSYGGQGGDSYGQQSSYAGQGQGGGGSG
GSYGRWSEGEGGGQGGRFGRDHGDHSEGGGFRGRGRGGYDRGGYDRGGYDRSGGYDRGGR
GGPPGMGGGDRGGYKNYGGGRDYGSRDEPAGEQDNSDNNTIFVQGLGEDVTVKEVGDFFK
QIGIIKVNKKTGLPMINIYNDKATGRPKGEATVSFDDPPSAKAAIEWFDGKDFNGKPIKV
SFATRRAEFTQRGGGRGGRGGFRGRGGGGGPNFDIKGGDWPCPNSSCGNMNFARRQECNK
CGAPKPGDGGFGGGDRGGRGGYGGDRGGGFRGRGGGFRGGDRGGYGGGGGGGYGGGYKMG
GRGDRRDDRRDRPY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggccactgattcaggctacggtggctctcaaagctacggatcatacactggtcagcag
ggtggacagggttatggacaaggaaatggcagtggctcttatgcgggacagagttatgga
ggctttggacagcaaggtgcaacacaagatggttatggccagtctcagcaacagagctat
gataattatggacaggaatcatctgggtacggggacaagtcgtcgtcatatggacaacaa
gcctcttatggacagcaaggctcttatgggcagcaaggttcctatggtgggcagggagga
gacagctatggacagcagagctcctacgctggccaggggcaaggaggtggcggcagcggt
ggcagctatggaagatggagtgaaggtgaaggtggtggtcagggtgggaggtttggacgt
gaccacggcgaccattcagaaggagggggcttcagaggccgaggccgtggcggctatgac
cgtggtggatacgaccgtggcggatatgaccgcagtggtggatacgaccgtggtggaaga
ggtggacctcctggtatgggaggtggtgaccgtggtggctacaaaaattacggtggtggt
cgagactatggctcaagggatgaaccagctggagaacaggacaactctgacaacaacacc
atttttgtacagggactgggagaggatgtcacagttaaggaagttggcgacttcttcaag
caaattggtattatcaaggtgaacaagaagaccggcctgccaatgatcaacatttacaat
gacaaggcaaccggtcggccaaagggagaagctacagtgtcatttgatgacccgccctct
gccaaagctgctatcgaatggtttgatggcaaggatttcaacggcaaacccatcaaagta
tcgtttgccacccgcagagctgagttcacgcagagaggaggtggaagaggagggcgagga
ggtttcagaggtcgtggtggtggcggaggacccaactttgacattaaaggaggagattgg
ccctgtcccaacagctcttgcggcaacatgaattttgcacgacggcaagagtgtaacaaa
tgtggtgcacctaaaccaggagatggaggatttggaggtggagaccgtggaggcagagga
ggttatggcggcgacagaggcggcggcttcagaggtcgtggaggaggtttccgcggtgga
gaccgtggtggctatggaggaggcggcgggggaggatatggaggtggctacaagatgggt
ggaagaggtgaccgtagagacgacagaagagaccggccatactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (56)   

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