KEGG   Lates calcarifer (barramundi perch): 108895144
Entry
108895144         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase DTX2
  KO
K06058  deltex [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108895144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108895144
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108895144
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108895144
SSDB
Motif
Pfam: DTC WWE zf-C3HC4 zf-RING_UBOX zf-UDP zf-rbx1 zf-RING_2 zf-LITAF-like
Other DBs
NCBI-GeneID: 108895144
NCBI-ProteinID: XP_018549303
Position
LG20:complement(2825317..2839434)
AA seq 644 aa
MAIVSGSCARVNGSRNGPSVSATPSGSVGQSQPMIAVWEWQDDLGYWRPYSGQVSAYIER
CLSPRGQRGGGPGSTSICLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRSLFAQSSGL
GSGVYWEWANDEGGWTPYETRTSILLEHSYQARQGTADLGPHGYNYIVDLTSLAQVNKAT
GFRRQVRRQCNLPYPLASSGPPAIPSGPACSCQQCLSHSXSTGPMPSRSRHSFSSGSLNR
PSLQGTGRAAAAHPTSVYSPYPRRPLSVGGMSWGSPWPPPPSGSQLSAPLLTSSASANGL
SVPSISVQLNGSTSVSSALAGMASILMSAVGLGVHFTTAPLPQQQQQQQLQPPPPPPPQQ
PAPFSLPPPLLPPASRPSKPHSSSSSSSVRRAKRQHRRASAQRPEEVIQRYMEVVAGVPD
EDCIICMDQLSNPSGYETPSTEEGGQSILSDTVGKFIKCGHTLHMLCMLAMYNNGTKDGS
LQCPSCKTIYGEKTGTQPKGKMEIYSIAQSLPGHPDCGTIQIIYSIPPGIQGPEHPNPGQ
PYTCRGFPRFCFLPDNDKGRKVLELLKVAWMRRLIFTVGTSSTTGEPDTVVWNGIHHKTE
MMSNLSGHGYPDPNYLDNVLSELASQGVTEDCLKPLGSSSSSSS
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggcgattgtgtctggctcctgtgccagggtaaacgggtctagaaatgggccctctgtg
tcagctacgccttctggatcagttggacagtcacagcccatgatagcagtatgggaatgg
caggatgacctgggctattggcggccttacagcggccaagtgagcgcctacatcgagcgg
tgtctgtcaccgcggggccagagaggaggaggacccggctcaacgagcatctgcctcgga
caatcagaccccagcctgtcgccttatctcattgacataccaagcttgaaacagtttcgg
caggatacaggaaagacccggtcagtacgtcggtccctgtttgcccagtcttcaggcctc
ggtagtggtgtttactgggaatgggccaatgatgaaggaggatggactccatatgagact
cgaacctctatccttttggagcacagctatcaggcccgccaaggcacagctgatttgggc
ccgcatggatacaattacatagtggatctcacatctctggcccaagtcaacaaagccaca
ggcttcagacggcaggtgcgacgccagtgtaacctcccgtacccactggcctcctctggc
cccccggccatcccctcgggccctgcgtgctcctgccagcagtgtttgagccacagtnnc
agcacaggacccatgcccagccgttcacgacattccttttcatcggggagtctgaaccgg
cccagcctgcaagggacagggagggctgcagcagctcaccccacttctgtctactcgcca
tatcctaggagacccctctctgttggagggatgtcttggggcagcccctggcctccacca
ccttctggtagtcagctgtctgcgccgcttctgacaagctctgccagtgcaaatgggtta
agtgttccctccatctctgtgcagctgaatggatccaccagcgtgagctctgccctggca
ggcatggcctccattttgatgtcagcagtgggactcggcgtgcacttcaccactgccccc
ctccctcagcagcagcagcagcagcagctacagccgccgccgcctccgccaccgcagcaa
cctgctcctttctctcttcctcctcctctcctccccccagccagcaggcccagcaagccc
cacagcagcagcagcagcagttcagttaggagagcaaagaggcagcacaggagagcctca
gctcagagacctgaggaggtgattcagcgctacatggaggtggtggctggagtgccggat
gaggactgcattatctgcatggatcaactgtccaatccatccggctatgagacaccatcc
acagaggagggaggccagagcatcctgtcagacactgtggggaaattcatcaaatgtggt
cacaccctgcatatgctctgcatgctggccatgtataacaatggaacaaaggacggcagc
ctgcagtgcccctcgtgtaagacaatctacggagagaagaccggcacccagcccaaaggc
aagatggaaatttacagcattgcccagtcgctgccaggtcacccagactgtgggaccatc
cagattatctacagcatacctccaggcatacagggcccggagcaccccaacccaggacag
ccatacacctgtagaggcttccctcgcttctgttttctaccagacaacgacaagggcagg
aaggtgctggagctgctgaaggtggcgtggatgcgtcgcctcatcttcaccgtgggtacg
tccagcaccaccggagagcctgacacagtagtgtggaacgggatccaccacaaaacggag
atgatgtccaatttgtcgggccacggctacccggaccccaactatctggacaatgttctt
tctgagctggcctctcagggcgtgacagaggactgcctcaaacctctgggcagcagcagc
agcagcagcagctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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