KEGG   Lates calcarifer (barramundi perch): 108898205
Entry
108898205         CDS       T04895                                 
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
  KO
K09236  teashirt
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108898205 (tshz1)
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    108898205 (tshz1)
SSDB
Motif
Pfam: zf-C2H2_4 zf-C2H2_2 zf-C2H2 Zap1_zf1 zf-C2H2_3rep zf-C2H2_6 Homeobox_KN DUF760
Other DBs
NCBI-GeneID: 108898205
NCBI-ProteinID: XP_018553637
UniProt: A0A4W6DPZ2
Position
LG3:complement(12842984..12873067)
AA seq 1130 aa
MPRRKQQAPRRSAAYGPEDEFKVDKIDEEEHLQDDGLSLDGQDADYLFNEDEDGRDHYSC
QNSPLSNGTNPDAGYASPLSTASDQLVDLKTASSFGDGQDKLEEKLGESTDSINGLSLQD
SLAKMKAVYANLISDASWSSIALDMLKSKEGNNFAASNGNGSNHKGSNGFLNSHSPGNIH
VKSRCSSSNASATTNITTSSTTTRTVSSSSNSGTSVSSGSTGGLAYDWHQAALAKTLQHT
PYQLLPEPSLFSTVQLYRQNNKLYGPVFTGASKFRCKDCSAAYDTLVGLTVHMNETGHYR
DDNKDTEDDRSKKWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY
QKVPLKEPMPALTSKLVPPTKKRAFQDLMSPSSPESVSSGILLGESPKDQKVANPYVTPN
NRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSASKKGK
QLVFDPVIEEKIQSIPLPPTTTRLPAPNGKSQPDSPLQPSSPEEKNEEKKDEEMEEEKME
AREPEKKIKEEKEDPPEKADKPGKARSYQYLREEDLEETPKGGLDILKSLENTVSSAISK
AQTGTPTWGGYPSIHAAYQLHGSLKSTMPTCAQVQPLFSSNSLKVLSSDLGTLIHSPNSP
SPPPSHRSNVLAMEELVEKVTGKSSVKNEKEEKPVENKCRSAKSPLPNPKDKRASPNPET
LSKTVKTTAAEDQTESRGKEGEQTESKAETQIKSEVDSPKKPVSNGCDNLSIITDHSPEQ
PLVNPLSALQSIMNNHLGKAAKVATPFIDPFAMLYKINSNSAQIKSAEPASQYHDDDQPM
DLTKSKNTNGSTAKGTSTTPNNNNTINNNKPVFRAFPQSSSPPLRENALMDISDMVKNLT
GRLTPKSTTPSSISEKSDIDSCTFEDGMEELSPIQRRKGRQSNWNPQHLLILQAQFASSL
RETPEGKFVISDLGPQERVHICKFTGLSMTTISHWLANVKYQLKRTGGTKFLKNIDSGQP
LFLCSDCASQFRTPSSYIHHLESHLGFTLKDLSKLSIDLLEQQAVSRIEDKTFSTSGLTE
DDTGSVYQCKLCNRTFVSKHAIKLHLCKTHGKSPEDHLIFVKELEKFDKQ
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgccgaggagaaagcagcaagcaccgcggcggtcagcagcttatgggcctgaggatgaa
tttaaagtggacaagattgatgaagaggaacatctgcaagatgatggcctctctctggac
ggtcaagatgcagactatctgttcaatgaggacgaggatggaagagatcactatagctgc
caaaactctccactcagcaatggcactaacccagacgctgggtatgcctccccactcagc
accgccagtgatcaactggtggaccttaagaccgcgtcctcctttggtgatggtcaggac
aagctagaggagaagctgggggagagcacagactccatcaatggcctctcactccaggac
agtctggcaaaaatgaaagccgtctatgcaaacctgatctcggatgcctcctggtccagc
attgctctggacatgcttaaaagtaaagaagggaacaactttgctgctagcaatggaaat
gggagcaatcacaaagggagcaacgggttcctgaacagtcacagcccaggcaacatccat
gtgaagagcagatgtagcagtagcaatgcctcagccactaccaatattaccaccagcagt
accaccacaagaacagtgtcaagcagcagcaacagtggcactagtgtaagctctggcagc
acaggaggattagcctatgactggcaccaggcagcattggccaaaaccctacagcatact
ccataccaactcctccctgagcctagccttttcagcaccgtgcagctttaccgacaaaac
aataagctctatggcccggtgtttactggtgccagcaagttcaggtgcaaggactgtagt
gcagcctatgacactttggttggtctgacagtgcatatgaacgagacaggccactaccgt
gatgacaataaggatacagaggatgatcgaagcaagaagtggtccaagccacgtaagcgt
tccctgttggagatggaaggcaaagaagatgcccagaaagttcttaaatgcatgtactgt
ggccactcttttgaatccttgcaagaccttagtgttcacatgatcaaaacaaaacactat
cagaaagtgcctctaaaagaaccaatgccagctctcacctcaaagctggtacccccaacc
aaaaaaagagcatttcaagacttgatgtcccccagctcaccagagtctgtctcatctggc
atactcctgggagagtctcccaaagaccaaaaagtggccaatccctatgtcactcctaac
aatcgatatggttaccaaaatggtgccagctatacttggcagtttgaggcacgtaaggca
caaattcttaaatgcatggaatgtggcagttcacatgacaccttgcaacaactgacagcc
cacatgatggtcacaggacactttcttaaggtcacaaattcagcatctaaaaaaggtaaa
cagttagtttttgatcctgtcattgaggagaaaattcagtcgattcccctgccaccaact
accacacgactcccagcacccaatgggaagtcgcagcctgactccccattgcagccatct
agccctgaggagaaaaatgaagaaaagaaagatgaagagatggaggaagagaaaatggaa
gctagggaaccagagaaaaaaataaaagaagagaaagaagaccctcctgaaaaagctgat
aaacctggaaaggccagatcttaccaatatctgagagaggaagacttggaagagacgcct
aaaggtggcttggatattctcaagtctttagagaatacagtttcaagtgcaatcagcaag
gcccaaacaggcacgccaacctggggtggataccccagcattcatgctgcctatcaactc
catggttctttgaagtctaccatgcctacatgtgcacaggttcagcctttgttcagcagt
aacagtttgaaggtgctctcctctgatttaggtactctgatccattcaccaaatagcccc
tctccacctccaagtcacaggagcaatgtgctggccatggaggagctggtagaaaaagtg
actgggaaaagttcagtaaagaatgaaaaagaggaaaaacctgtagagaataaatgcagg
tctgcaaagtccccattgccaaatcccaaggacaaacgggcttcacccaatccagaaact
ctctcaaagacagtgaaaactactgcagcagaggaccagactgagtcaagaggcaaggag
ggagagcagacagagagtaaagcagagacacagattaagagtgaagttgattcaccaaaa
aagcctgtaagcaatggctgcgataacctgagcatcatcactgatcactcgcctgagcaa
ccacttgtcaaccctctcagtgctttgcagtctatcatgaacaaccacttgggtaaagct
gcaaaagtggccacccccttcatagacccctttgcaatgctttataagatcaacagcaac
tcagctcagattaagtcagcagagcctgcaagtcagtaccatgatgatgatcagcccatg
gacttgacaaaatccaaaaacactaatggaagtacagctaagggtacttctaccacacca
aacaacaataacacaattaacaacaacaaaccagttttcagagctttccctcagtcatca
tctccacctctgcgggagaatgctttgatggatatttcagacatggtgaaaaatctgact
ggccgtttgacaccaaagtctacgaccccgtcttctatctctgagaaatcagacatcgat
agctgtacttttgaggatggcatggaggagctgtctcccatccaaagacggaaaggcaga
cagtcaaactggaatcctcagcacctcctgattctccaggcccagtttgcctccagtctt
agggagactcctgagggaaagtttgtaattagtgacttgggaccccaagagcgggtccac
atctgtaaattcactggtctctccatgactactatctctcattggctggccaatgtaaaa
taccagttaaagcggacagggggcacaaagttcctaaaaaatattgactctggccagcct
ctgtttttgtgcagtgactgtgcatcccagttcaggactccctcctcctacattcaccat
ttggagtcccatcttgggtttaccctgaaggacctctcaaagctatccatagacttacta
gagcagcaagcagtcagcagaatagaggacaagactttcagtacctctggactcacagaa
gacgacactggctcggtatatcagtgcaaactgtgcaatcggacatttgtgagcaaacat
gcaatcaaattgcacctttgcaaaacacatggaaagtcaccagaggaccatctcatcttt
gtgaaagaattggaaaagtttgacaaacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system