KEGG   Lates calcarifer (barramundi perch): 108901910
Entry
108901910         CDS       T04895                                 
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcf03032]
    108901910 (zgc:173742)
Enzymes [BR:lcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     108901910 (zgc:173742)
DNA replication proteins [BR:lcf03032]
 Eukaryotic type
  DNA Topoisomerases
   108901910 (zgc:173742)
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc
Other DBs
NCBI-GeneID: 108901910
NCBI-ProteinID: XP_018559111
UniProt: A0A4W6DBV6
Position
LG10:complement(20457324..20482215)
AA seq 747 aa
MGREKEAKGDGKAKHKATKLKRLSDHESAGAGGDTLKNSTKPTKSTEKTVNGKSHKKVKT
PKTETLESANKPNKSVKEEPEDEDFTVTKKGLKRKRIKDEPMEGPSHSSATPVSKKKNKQ
HEQEDESDEEAQKKKSKKRKEKTVKKEEEEHPVSKKPKRTKEEIEEARQLKIKKKEEEEQ
NRWRWWEEEKYEDGVKWKFLEHKGPYFPPEYQPLPDNVNFYYDGKKVKLSLAAEEVALFF
AQMLDHEYTTKKVFRENFFIDWRKEMTHEEMLLIQDLDKCDFGEIHAMHKAKVEARKNMT
KEEKLVLKEANQKIVDEYGFCLLDHHKERIGNFKIEPPGLFRGRGEHPKQGMLKKRIQPE
DVIINCSKESCVPVPPAGHHWKEVRHDNTVTWLASWTENIQGSIKYIMLNANSKLKGEKD
WEKYEVARKLKTCVDNIRNQYLHDLKSKEMGTRQRAVALYFIDKLALRAGNEKEEGETAD
TVGCCSLRVEHITLHEQLEGNECVVEFDFLGKDSIRYYNKVPVIRKVFKNLKLFLENKQP
GDDLFDRLNTHTLNKHLSSLMPGLTAKVFRTYNASITLQQQLKELTNKSDNVAEKLLSYN
RANRAVAILCNHQRAPPKTFEQSMANLQAKIDARKEQLALAKTELKQAKKEAKTKGSSDP
KLQMLVERKKAAVKRCEEQLLKMEVQATDREENKQIALGTSKLNYLDPRISVAWCKNMEV
PVEKIYNKSQRDKFAWAIDMTEADFEF
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgggaagagagaaagaggctaaaggagacgggaaggccaagcacaaagcgacgaagctg
aaaaggctgagtgatcatgaaagcgctggtgccgggggagatacgctcaagaacagcaca
aagccaactaaatctacagagaaaactgtcaatggaaagtctcataagaaggtcaagacg
cctaagacagaaaccctggagtcagccaacaagccaaacaagtcagtgaaagaggagcca
gaggacgaggacttcactgtgacaaagaaagggctgaaaaggaaaagaatcaaagatgag
cccatggaaggcccgtcacactccagtgccacacctgtctctaagaaaaaaaataagcaa
catgagcaggaagatgaaagtgacgaagaggctcagaaaaagaaatcaaaaaaaagaaaa
gaaaagacagtaaagaaggaggaagaagagcatccggtctcgaaaaagcctaagaggaca
aaggaggagattgaggaggcaagacagttgaagatcaaaaagaaggaggaggaggagcag
aatcgctggagatggtgggaagaagaaaagtatgaagatggggtgaaatggaagttcctg
gaacacaaaggaccctacttccctcctgagtaccagcctctacctgacaatgttaacttt
tactatgatggtaagaaggtgaagctgagcctggcagctgaggaggtggcgctgttcttt
gcccaaatgttggaccatgagtacaccaccaaaaaggttttccgggagaacttctttatt
gattggaggaaggaaatgacccatgaggagatgttgctgattcaagatcttgacaagtgt
gattttggagagatccatgccatgcataaagccaaggtggaggccaggaaaaacatgacc
aaagaggagaaactggttttgaaagaagccaatcagaagatagtggatgagtatggcttc
tgtctgctggaccaccacaaagagcgcattggcaactttaagattgagcctcctgggctg
tttaggggtaggggcgaacaccccaaacagggcatgctgaagaaaaggatccagccagag
gatgtcatcatcaactgcagcaaagaatcctgtgtcccggtgccgcctgctggtcaccac
tggaaggaggttcgacatgacaacactgtgacgtggctggccagctggactgagaacatc
cagggctccattaaatacatcatgctcaatgccaactcaaaacttaagggagagaaggac
tgggagaaatatgaggtcgctcggaaactgaagacatgcgtggacaacatccgtaaccag
tacctccatgatctcaagtctaaagagatgggcactcgccagagagccgtggccctctac
ttcatagataagctggcactgagagctggtaatgagaaggaggagggagagacggcagac
acagttggctgctgctcgctacgcgtcgagcacatcaccctgcacgagcaactggaaggc
aatgagtgtgtggtggagttcgacttcctgggtaaagactccatccgttactacaacaag
gtccctgtcatcaggaaggtttttaagaatcttaaactgttcctggagaacaagcaacct
ggagacgacctctttgatcgccttaatacgcacacgctgaacaagcatctgagctcccta
atgccaggtctgactgcaaaggtcttcaggacatataacgcctccatcaccttacagcag
caactcaaagagctcacaaacaagtcagacaatgtggcagagaaactgctgtcctacaac
agggctaacagagcagttgctattctctgtaaccaccagcgggcgccgccaaagactttt
gaacagtctatggctaatctacaggccaagattgatgctagaaaggaacagctggcccta
gctaagacggaactgaaacaggccaagaaggaggctaagaccaaaggcagctcagacccc
aagctgcagatgctggtggagcggaagaaagcagcagtgaagcgatgtgaggagcagctg
ctgaagatggaggtccaggcgactgacagagaagagaacaaacagattgcgctaggtacc
tcaaagctcaactatctggacccacgcataagtgtggcttggtgtaagaacatggaggta
cctgtggaaaaaatctacaacaaaagccaaagggacaagtttgcctgggccatcgacatg
acagaggcagactttgagttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system