KEGG   Leptothrix cholodnii: Lcho_0139
Entry
Lcho_0139         CDS       T00681                                 
Name
(GenBank) PUA domain containing protein
  KO
K06969  23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lch03009]
    Lcho_0139
Enzymes [BR:lch01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     Lcho_0139
Ribosome biogenesis [BR:lch03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Lcho_0139
SSDB
Motif
Pfam: Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 Methyltransf_25
Other DBs
NCBI-ProteinID: ACB32414
UniProt: B1Y6T6
Position
143174..144367
AA seq 397 aa
MKTIRLRSGKERSLQRKHPWVFEGSIASGKADAGETVRVEAADGRFLAWASYSPSSMIRV
RAWSWDEAERIDAAFIARRVQAAVAMRARLGLASDGVRLIHGEADGLPGLVVDRYADILS
AQFLSAGAERWKGVIADALLAATGCTRLYERSDASVRKLEGLEPATGWLRGGSEKEGSTE
VTITEHDWRLTLDVAEGHKTGYYLDQRDNRALFARLVRQFGIRRVLNCYSYTGGFSVAAL
AGGASEVVSVDSSGPALARASAHVTLNGFDAARHTALDADVNATLRQLLAEGRTFDAIVL
DPPKFAPTPASAERAARAYKDINRLALKLLVPGGLLLTFSCSGGISADLFHKIVAGAGMD
ADVDGYLLQRLEAASDHPTTICFPEGEYLKGLVVLRR
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaaaaccatccgtctgcgctcaggcaaggagcgctcgctgcagcgcaagcacccgtgg
gtgttcgagggcagcatcgcctcgggcaaggccgatgcgggcgagaccgtgcgggtcgaa
gccgccgacggccgcttcctggcctgggccagctacagcccgagctcgatgatccgcgtg
cgcgcctggagctgggacgaggccgagcgcatcgacgccgccttcatcgcccggcgcgtg
caggcggcggtggcgatgcgtgcgcgcctgggcctggccagcgacggcgtgcgactgatc
cacggcgaggccgacggcctgcccggcctggtggtcgaccgctacgcggacatcctgagc
gcgcagttcctgagcgccggcgccgaacgctggaaaggcgtgatcgccgacgcgctgctg
gccgccaccggctgcacgcggctctacgaacgctcggacgccagcgtgcgcaagctcgaa
ggcctggagccggccaccggctggctgcgcggaggttctgagaaggagggcagcaccgag
gtcaccatcaccgaacacgactggcgcctgacactcgacgtcgccgaaggccacaagacc
ggctactacctcgatcagcgcgacaaccgcgcgctgttcgcccggctggtgcgtcagttc
gggatccggcgcgtgctcaactgctacagctacaccggcggcttctcggtggcggcgctg
gccggcggcgcgagcgaggtggtgagcgtcgattcgtccggcccggcgctggcacgcgcg
agcgcccacgtcacgctcaacggcttcgacgcggcgcgccacacggcgctcgatgccgac
gtcaacgccaccctgcgccagctgctggccgagggccgcacgttcgacgccatcgtgctc
gacccgcccaagttcgcgcccaccccggccagcgccgaacgcgctgcgcgggcctacaag
gacatcaaccggctggcgctcaagctgctggtgccgggcgggctgctgctgaccttcagc
tgctcgggcggcatcagcgccgacctgttccacaagatcgtggccggcgcgggcatggac
gccgatgtcgacggctacctgctgcagcggctggaggccgccagcgaccacccgaccacg
atctgcttccccgagggcgagtacctcaaggggctggtggtgctcaggcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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