KEGG   Leptothrix cholodnii: Lcho_0598
Entry
Lcho_0598         CDS       T00681                                 
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lch03019]
    Lcho_0598
   03009 Ribosome biogenesis [BR:lch03009]
    Lcho_0598
   03036 Chromosome and associated proteins [BR:lch03036]
    Lcho_0598
Enzymes [BR:lch01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Lcho_0598
Messenger RNA biogenesis [BR:lch03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Lcho_0598
Ribosome biogenesis [BR:lch03009]
 Eukaryotic type
  90S particles
   RNase
    Lcho_0598
 Prokaryotic type
  rRNA processing factors
   Lcho_0598
Chromosome and associated proteins [BR:lch03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Lcho_0598
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ACB32873
UniProt: B1XZM7
Position
complement(647339..648025)
AA seq 228 aa
MSTYPLDTLQARLGHVFRDQSLLLRAVSHRSHGADHNERLEFLGDAVLNMTVSDLLFDQF
DDSPEGDLTRVRAHLVRQDMLHRLALSLQLPAVLRLSDGEARAGGAQRPSILADAMEAVI
GAVYRDAGYEAAQALVRRLFEPLVSETVTQAWAKDAKTQLQEWLQARRQSVPEYRIETTR
GRAHDQTFVVVCSVAGPGIEARGEGRSRRAAEQEAARLVLEQLSSTPE
NT seq 687 nt   +upstreamnt  +downstreamnt
ttgtccacctacccgctcgacacccttcaggctcgcctcggtcacgtcttccgtgaccag
tccctgctcttgcgcgcggtttcgcaccgcagccacggggccgaccacaacgagcggctc
gagttcctcggtgacgcggtgctgaacatgacggtctccgacctgctgttcgaccagttc
gacgattcacccgaaggcgacctgacccgcgtgcgcgcccacctggtgcgccaggacatg
ctgcatcgcctggcgctgtcgctgcagttgccggcggtgctgcggctgtccgacggcgag
gcgcgtgccggtggcgcgcagcggccgtcgatcctggccgacgccatggaggcggtgatc
ggcgcggtctaccgcgacgccggttatgaagccgcgcaggcgctggtgcgacggctgttc
gaaccgctggtgtccgaaaccgtgacgcaggcctgggccaaggacgccaagacccaattg
caggagtggctccaggcacgtcgccagagcgtgcccgaataccgcatcgaaaccacccgc
ggccgcgcccatgaccagaccttcgtggtcgtctgcagcgtcgccggcccgggcatcgaa
gcgcgtggtgaaggccgttcgcgccgtgccgccgaacaggaagccgcgcgcctggtgctc
gaacaactcagctcgacacccgaatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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