KEGG   Leptothrix cholodnii: Lcho_1913
Entry
Lcho_1913         CDS       T00681                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lch03009]
    Lcho_1913
Enzymes [BR:lch01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     Lcho_1913
Ribosome biogenesis [BR:lch03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Lcho_1913
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ACB34180
UniProt: B1Y0S2
Position
2069677..2070927
AA seq 416 aa
MVTLKLKKPLNPTETETTRPRLPVRNGVSGPRPRPTLAQAQAERARRAEEYGGQPVDPDR
RRPPQRQDQDRPPMPRRDDQGRGFAPRRDDPPQRPAYRDERPARNEPQVRDDRRSGPPAE
RTPWYAPQSHQEAPAARARRVLEPARPVRPGTPSQRPARPAEVPSSPLAGEGERLSKRMA
ALGLASRREADEWIEAGWVRVDGKMAVLGQRVGPQAKIHVDPAAHKQQAQRVTILVNKPV
GYVSGQAEDGYEPAAALIRPENRWSEDSSGVNWHPGQLRGLAPAGRLDIDSVGLLVLTQD
GRVAKLLIGDESLVEKEYLVRVAYQGQGRLPDSALALLNHGLELDGQALRPAKVSWQNED
QLRFVLREGKKRQIRRMCEAVGLQVLGLKRVRIGSVSLGHLPAGQWRYLRRDEFFI
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggtcacgctcaaactgaagaaacccctcaacccgacggagaccgaaaccacgcggccg
cgactgcccgtgcgcaacggcgtcagcggcccccgtccgcggccgacgctggcgcaggcc
caggccgaacgggcgcgccgtgccgaggaatacggcggccagcccgtcgatccggatcgc
cgccggccgccgcagcgtcaggatcaggaccgccccccgatgccgcgtcgtgacgaccag
ggccgcggctttgcgccgcgccgtgacgacccgccgcagcggccggcctatcgcgacgag
cgccccgcacgcaacgagccgcaggtccgcgacgatcgacgcagcgggccgcccgccgaa
cgcacgccgtggtatgcgccgcagtcgcatcaggaggcaccggccgcacgggcgcggcgg
gtgctcgagccggcccgcccggtgcgaccgggcacgccgtcgcagcgccctgcccggccg
gccgaggtgccctcctcgcccctggccggcgaaggtgaacgcctgtccaaacgcatggct
gcactcggtctggcgtcgcgccgggaggccgacgagtggatcgaggctggctgggtgcgg
gtcgacggcaagatggcggtgctcggccagcgggtcggcccgcaggcgaagatccacgtc
gatcctgccgcgcacaagcagcaggcccagcgcgtcacgatcctggtcaacaagccggtc
ggctacgtcagtggccaggccgaggacggctacgagccggccgccgcgctgatccgaccc
gaaaaccgctggagcgaagacagctcgggcgtcaactggcaccccggccagctgcgcggg
ctggcaccggccggccggctcgacatcgattcggtcggtctgctggtgctgacgcaggac
ggccgtgtcgccaagctgctgatcggcgacgaatcgctggtcgagaaggaatacctcgtg
cgcgtggcctatcaaggccagggccggctgcccgacagcgcgctggcgttgctcaatcac
ggcctcgagctcgacggtcaggcgctgcggccggccaaggtcagctggcagaacgaggat
cagctgcgcttcgtgctgcgcgagggcaagaaacgccagatccggcgcatgtgcgaggcc
gtcggcctgcaggtgctgggcctcaagcgggtgcgcatcggcagcgtctcgctcggccat
ctgccggccgggcaatggcgttacctgcgccgcgacgagtttttcatctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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