KEGG   Leuconostoc citreum: LCK_01242
Entry
LCK_01242         CDS       T00663                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
lci  Leuconostoc citreum
Brite
KEGG Orthology (KO) [BR:lci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lci03019]
    LCK_01242
   03009 Ribosome biogenesis [BR:lci03009]
    LCK_01242
Enzymes [BR:lci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LCK_01242
Messenger RNA biogenesis [BR:lci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LCK_01242
Ribosome biogenesis [BR:lci03009]
 Prokaryotic type
  rRNA helicases
   LCK_01242
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_30 PrpR_N Flavi_DEAD AAA_22
Other DBs
NCBI-ProteinID: ACA83067
UniProt: B1MZW5
Position
complement(1295597..1296961)
AA seq 454 aa
MAEKANQFGQFNLKSDIISALTAIGFIQPTAVQAKLIPAVLQGHDVVGQSQTGSGKTHTF
LIPIINQLEQGKNYVQAVITTPSRELAAQITKAAKQFADKLPYEVTISEFVGGTDKLRQV
KQLENNQPQIIIGTPGRIKDLVSSGALKLHAVKTLVVDEADMTLDMGFLNEVDYIAGAMP
EKLQTLVFSATMPEKLKPFLKKYLDNPKFEAIPVSTVIAETIDNWLLATKSKDKNDVIYQ
ILSISNPYLALVFANTKDRAKEIASNLRSKGLKVAEIHGDIEPRERRRVMKAIQNLDYQY
VVATDLAARGIDIEGVSHVINDDIPGELEFFVHRVGRTGRNGMPGLAITLYGPDEEDEVV
ELESLGIDFKAKQIKDNQIIDVKDRRARKQRVATTKKLDPTMVGMVKKKKKIVKPGYKRR
IKSAIQRKNQMDRRISQREEMRAVRKANKKRGDA
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcagaaaaagcaaaccaatttggacaatttaatttaaaatcagacattatttcagca
ctaacagctattggttttatacaaccaactgcagttcaggctaaattaatcccggccgtt
ttacaagggcacgatgttgttggccagtcgcaaacaggttcaggtaagacgcatactttt
ttgattccaattattaatcagttggagcaaggaaagaattacgtacaagcggtaattaca
acaccttcgcgtgaacttgctgcacaaattacaaaagcggcgaagcagtttgctgataag
ttgccttacgaggtaacaatttcggaatttgttggtggcacagataagctacgacaagtt
aaacaattggaaaataatcaaccacagattattattgggacaccagggcgtataaaagat
ttagtttcctctggtgcgctaaaattgcatgcagttaaaacattagttgttgatgaagcg
gacatgacattggatatgggtttcttaaatgaagtggactatattgcaggtgctatgcca
gaaaaattgcaaacgctagttttcagtgcaaccatgccagaaaaactcaagccgttctta
aaaaaatatttggataatcctaaattcgaagcaattcctgtttcaactgttattgccgaa
acaatcgacaactggttgctagctacaaaatcaaaagataaaaatgatgtcatttatcag
atcctaagtattagcaatccctatttagcacttgtttttgccaacacaaaggatcgcgcg
aaagagatagctagcaatttacgtagtaaaggtttaaaagtcgctgagattcatggggat
attgagccaagagaacgtcggcgcgtcatgaaagcgattcaaaacttagattatcaatat
gttgtggcaactgatttagcagctcgaggtattgatattgaaggtgtatcgcatgtgatt
aatgatgatatacctggtgaacttgaattctttgttcaccgtgttggtcgtacagggcgc
aatggtatgccaggattggcaattaccttgtatggaccagatgaagaagatgaagtagta
gagcttgaatcattgggaattgattttaaagcaaaacaaattaaagataatcaaattatt
gatgttaaagatcgtcgtgcacgtaaacagcgtgtggcaacgactaaaaagcttgaccca
acaatggttggcatggttaaaaagaaaaagaaaattgttaaaccaggttataagcgacga
attaaatcagctattcaacgtaagaaccaaatggatcgacgtatttctcaacgtgaagaa
atgcgtgcagtgcgtaaggctaacaaaaaacgtggtgacgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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