KEGG   Latimeria chalumnae (coelacanth): 102354536
Entry
102354536         CDS       T02913                                 
Symbol
RABGGTB
Name
(RefSeq) Rab geranylgeranyltransferase beta subunit
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lcm01006]
    102354536 (RABGGTB)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102354536 (RABGGTB)
Enzymes [BR:lcm01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     102354536 (RABGGTB)
Prenyltransferases [BR:lcm01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   102354536 (RABGGTB)
Membrane trafficking [BR:lcm04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    102354536 (RABGGTB)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    102354536 (RABGGTB)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 102354536
NCBI-ProteinID: XP_006004875
Ensembl: ENSLACG00000008589
Position
Un
AA seq 331 aa
MGTPVKDVVIKSDAPSSLLLEKHADYIVVYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM
GHLQRMNKEEILEFIQSCQHDCGGISASIGHDPHLLYTLSAVQILTLYDSLHVIDVNKVV
KYVQSLQHDDGSFAGDKWGEIDTRFSFCAVATLALLGKLDAINIAKSVEFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLAITSQLHHINADLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLASLKIIGRIHWIDKDKLRHFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL
LGDEQIKPVNPVFCMPEEVLRRINVQPELLN
NT seq 996 nt   +upstreamnt  +downstreamnt
atgggaaccccagtgaaggatgttgttataaaatctgatgctccaagttcattattatta
gaaaaacacgcagattacatagtagtttatggatcaaagaaggatgattatgagtactgt
atgtcggagtatttgcggatgagtggagtttattggggtttgacagtcatggatctcatg
ggacatctccagcgtatgaacaaagaagaaattcttgaattcattcaatcatgtcagcat
gactgcggtggaatcagtgccagtataggtcacgatccccaccttttatatactcttagt
gctgtacagatccttactttgtatgatagtcttcatgttattgatgtaaataaagttgtt
aagtatgtacagtcactacaacatgatgatggctcatttgctggtgacaaatggggtgaa
attgacacaagattctctttctgtgctgtagcaacattagctcttttggggaaacttgat
gctattaatatagctaaatcagtagaatttgttttatcctgcatgaactttgatggggga
tttggttgtagacctggctcggaatcccatgctggccagatatactgttgcacaggattt
ctagctattactagccagttacatcatatcaatgctgatttactgggctggtggctttgc
gaacggcagttaccatctggtggcctcaatggaagaccggagaagttaccagatgtttgc
tattcttggtgggtacttgcttctctaaaaataattggaagaatccactggattgacaaa
gataaacttcgccactttatcttggcctgccaggatgaggaaactggaggatttgctgac
agaccaggagatatggtggaccctttccatactttatttggaatagctggactgtccctg
ttgggagatgaacagatcaaaccagtgaaccctgttttttgtatgccagaagaagtcctg
cggaggataaatgtacagcctgaacttttgaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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