KEGG   Latimeria chalumnae (coelacanth): 102358346
Entry
102358346         CDS       T02913                                 
Symbol
TRAIP
Name
(RefSeq) TRAF interacting protein
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102358346 (TRAIP)
Enzymes [BR:lcm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102358346 (TRAIP)
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102358346 (TRAIP)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_5 zf-RING_UBOX DUF1664 zf-C3HC4_3 GAS Crescentin WEMBL zf-ANAPC11 HMMR_N zf-C3HC4_4 Tektin DUF745 CCDC22_CC HIP1_clath_bdg DUF3450 DUF3168 MscS_porin CATRA-C DUF5790 MAD zf-RING_16 DUF1759 DUF5517 AAA_13 Zn-ribbon_8 Phage_GP20 Vps52_CC FH2 CCDC93_CC
Other DBs
NCBI-GeneID: 102358346
NCBI-ProteinID: XP_006002702
Ensembl: ENSLACG00000012407
Position
Un
AA seq 459 aa
MPIRAYCTICSDFFDNTRDVAAIHCGHTFHYECLIQWFQSAPCRTCPQCRIQVTTRHIIS
KLFFDVGVEEEVAPDAESLQNELDRVKAQLSVKEKEKRECQSIVDTVRDTLDNRNATIES
LRRELGETDTLCSTLKKQLKYLEQQQDGAKSAKEEARKLRNKMKSMESIEVLLQGQRAEV
EEMIRDMGVGPLAVEQLSIYCVSLKKEYENLKEARKNSSEMTEKLKRELFASNNKLQKSL
SELNKVKEELQAAQEEVRSADKEITSLKKKVEFLQKALSSPTRTNEAISRLVFESPAPLE
LQKPCLHRPANSDCIDLDVAFNVDTPEHVAQKSIFVPAKKKKLDAENPGMTSQSTSAPVL
QARKTNQKLTKAEKELPVPLLFRNSMLFSKNCFGSLLEPHKNSGTVRMGFDGLGGRTKFI
QPTSLTEIRPLATSLKRKKVSRLVPVSLSTQPKLDEFLK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgccaattcgtgcctactgtactatttgttctgacttctttgacaacaccagggatgtg
gcggctatccactgtggtcacaccttccactatgagtgcctcatccagtggtttcagtcg
gctccctgcaggacttgtccacagtgtcgaatacaggtgactaccagacacatcatcagt
aagctgttcttcgatgtgggagtggaggaggaagtggctcctgatgcagagagtttacag
aatgaattggacagggtgaaggcccagctctccgtgaaagagaaagaaaagcgggaatgc
cagtcaattgtagacactgtgagggacacactagacaatcggaatgctaccatcgagtct
ctaagaagggagctgggagagaccgatacgctctgttcaactctcaagaaacagttaaag
tacctggaacagcagcaggatggagcgaagtctgcaaaggaggaagctcgtaaactccgc
aacaagatgaaatcgatggagagtattgaggtgttgcttcaaggccagagagcagaagtg
gaggagatgattcgtgatatgggtgtgggccccttggcagtcgagcagctctccatctac
tgtgtgtctttgaagaaagagtacgagaacttaaaggaagctcggaaaaattccagtgag
atgactgaaaaactgaagagagagttatttgcctctaataataagttacagaagtcctta
tctgaattgaacaaagtgaaagaagaattacaggcagctcaggaggaagtgaggagtgcg
gacaaagaaatcacgagtttgaagaaaaaggttgaattcttgcagaaggctctgagctcg
ccaacccgaacaaatgaagccatcagccggctggtctttgagagtcccgctcctttggag
ttacagaaaccttgtctacaccggccggccaacagtgattgcattgacctcgatgtggcc
ttcaatgttgatacgcctgaacacgtagcgcagaaatccatctttgtcccagcaaaaaag
aagaagttggatgcagaaaaccctggtatgacatcccagtccacctctgctccagtttta
caagccagaaagacaaatcaaaaactgacaaaagcagaaaaggagcttcctgtccctctt
ctcttccgaaactccatgctgtttagcaagaattgctttggaagcctgctggaaccccac
aagaacagtggaactgtgaggatggggttcgatggcttgggcggaagaacaaagtttatt
cagcctaccagcttgactgaaattcgccccttggcaacatccctgaagaggaaaaaagtg
agccgccttgttcctgtgtctttatcgacccaacccaaactggatgagtttctgaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (34)   
   Pfam (34)   
All databases (80)   

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