KEGG   Latimeria chalumnae (coelacanth): 102360569
Entry
102360569         CDS       T02913                                 
Symbol
ITGB5
Name
(RefSeq) integrin subunit beta 5
  KO
K06588  integrin beta 5
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04145  Phagosome
lcm04148  Efferocytosis
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
lcm04810  Regulation of actin cytoskeleton
lcm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102360569 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102360569 (ITGB5)
   04148 Efferocytosis
    102360569 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102360569 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102360569 (ITGB5)
   04810 Regulation of actin cytoskeleton
    102360569 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102360569 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcm04515]
    102360569 (ITGB5)
Membrane trafficking [BR:lcm04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    102360569 (ITGB5)
Cell adhesion molecules [BR:lcm04515]
 Integrins
  Integrin beta subunits
   102360569 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt I-EGF_1 EGF_2 RNA_pol_A_CTD DUF2975
Other DBs
NCBI-GeneID: 102360569
NCBI-ProteinID: XP_014344922
Position
Un
AA seq 672 aa
MQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLTEEMKKLTSNFRLGFGSFVDKNI
SPFSYTASKYQNNPCLGYKLFPNCVPSFGFRHLLSLTDKVDRFNEEVQKQMVSRNRDAPE
GGFDAILQAAVCQEKIGWRKEASHLLVFTTDDVPHLALDGKLGGLVQPNDGNCHLNEKNE
YGASTQMDYPSLALLGEKLAENNIHLIFAVTKSHYVLYKDFTALIPGTTVEILDQDSKNI
IQLIVNAYNNIRSKVELTVSTHPGYINLAFTATCQDGLARPGLRKCGDLKTGDTVSFDVS
VEARSCPPEGTRHGFTIKPVGFRDLLEVTVTYDCVCRCSKLTEATSSKCSGNGTYECGSC
KCDPGFLGAKCECQEGEGSSLYQTMCREVEGKPVCSGRGKCSCSQCICYESEFGKIYGQF
CECDDFSCARHKGVLCSGHGECHCGECKCHAGYIGDNCNCSIETDTCISSDGQMCSSRGN
CVCGRCQCAHPGAFGDTCEKCPTCPDACGSKRDCIECRLYSSGRLADNQTCQKLCKDEII
TVDVLKTDEQDAVLCLYKTENDCVMRFTYLEHTSGKSVLTVLKEPECGSPPDAMTVLLAV
VGSILLVGIALLAIWKLLVTIHDRREFARFQSERSRAKYEMASNPLYRQPISTHNVETMF
NMRSKSYNGTVD
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgcaagttcggcaggtggaggactatccagttgacttgtactacctgatggatctctcc
ctttccatgaaggacgacttggacaatatccgtaacttgggaaccaaactgactgaggag
atgaagaaactcactagcaactttcgtctgggctttggatcttttgtggataaaaatata
tcgcccttctcctacacggcctctaaatatcagaataacccatgcctgggttataagtta
tttccgaactgcgttccttcctttgggtttcgccatctgctctccctgactgataaggtg
gaccggttcaacgaggaggtccagaagcagatggtatccaggaaccgagacgccccagag
ggaggctttgacgcaatcctgcaagcggcagtgtgccaggaaaagataggctggcggaag
gaggcgtcccacctcttggtatttaccacagacgacgtaccccacctcgctctggacggg
aaactcggggggctggtgcagcccaacgatggaaactgtcacctgaatgagaagaacgaa
tacggagcctccactcagatggattatccgtctctcgcacttctgggagagaagttggcg
gaaaacaatatccaccttatatttgctgtcacgaaaagtcactacgttctctacaaggat
tttacagcactgatacccggaaccacggtggaaatcctggatcaagactctaaaaatatt
attcagctgatagttaatgcttataataatatccgctctaaggtagaactgaccgtttca
actcaccctggttacatcaatctggctttcactgctacttgtcaagacgggcttgcacgt
ccgggactgaggaagtgcggtgacctcaaaaccggagacacggtgtcgtttgatgtgagt
gtggaggccaggagttgcccgcctgagggcaccaggcacggctttacgatcaagcctgtg
ggattccgggatttgctggaggtgacggtgacctacgactgcgtctgtcggtgctccaag
ctgacggaggctaccagcagcaaatgcagcggcaacgggacctacgagtgcggctcgtgc
aagtgcgaccccggctttttgggggccaagtgtgaatgccaggagggggagggcagtagc
ctctatcagacgatgtgccgggaagtggaagggaagccagtctgcagcgggaggggcaag
tgcagctgtagccagtgcatctgctacgaaagtgagttcggaaagatatacggacagttc
tgtgagtgcgatgacttctcctgtgccaggcacaaaggcgtcctctgctcaggtcacggg
gagtgtcactgcggagaatgcaaatgccacgccggctacatcggggacaactgtaactgc
tcgatcgaaacggacacgtgcatctccagtgacgggcagatgtgcagcagccgggggaac
tgtgtctgtggaaggtgtcagtgtgcccaccctggggcctttggggacacctgcgagaag
tgcccaacatgtcctgatgcctgcggttcaaaaagagattgtatcgaatgcagattgtac
agttcgggaagactggcggacaatcagacttgtcagaaactctgcaaagatgagattatc
acggtggacgtcctcaaaacggatgagcaggacgcagtgctgtgtttgtataagactgaa
aatgactgtgttatgagattcacctacttggaacacaccagcggcaaatctgtcctgacc
gtcttaaaagaaccagaatgtgggagcccaccagatgcaatgacggtcctgcttgcagtg
gttggcagtattttgctggtaggcatcgcgctgcttgcgatatggaagctgctcgtcacc
atccatgaccggcgggagtttgccaggttccagagcgaacggtccagggccaagtatgaa
atggcctcgaacccactgtatagacagcctatttcaacacacaatgtggagaccatgttt
aacatgcgaagcaagtcctacaatgggacagttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (61)   

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