KEGG   Latimeria chalumnae (coelacanth): 102361378
Entry
102361378         CDS       T02913                                 
Symbol
NUP160
Name
(RefSeq) nucleoporin 160
  KO
K14303  nuclear pore complex protein Nup160
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102361378 (NUP160)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102361378 (NUP160)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102361378 (NUP160)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102361378 (NUP160)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102361378 (NUP160)
SSDB
Motif
Pfam: Nup160 TPR_1 TPR_2 ANAPC3 TPR_12
Other DBs
NCBI-GeneID: 102361378
NCBI-ProteinID: XP_014343546
Ensembl: ENSLACG00000019014
Position
Un
AA seq 1233 aa
MAAAVAEAERSFSEICSVERESGVKYRDITIDIGISSGDTLQLVEESLDSNLLNNAVRLK
IVNCNVLPGGVWVSETRSHVAILFLTNQTVHRLILPHPCRIYRSELVTELQIQSIFTDIG
RVNFRDPSNSSLIPVSPGLAPGSSTSTAWLTSEGEALFAVPSASGGILVVKLPPHDVQGV
VSVLELKQSSVVQRLLTGWMPTAIRGDQGPSDLPISLCVHCLEHDAFLFALCQDHKLRMW
SYKDQLCLMVWDMLEYIPVNRDLRHTLGSGHRLRLAFSPSTGLYLGVYLHAPRRGQFCVF
QLVSVEQSRYSLDHISSLYASQEMLVDFALTPTDVWALWQDEENQTIVKYINFEQGCSLQ
EAYLEVLFSPGRFTVSALLKALQIFRRGTERIFDLSWDTLRKEVTLAVENELRKGYISFL
VPCSLVDHLYLSSDEHLQTEDETAIADDLGVGRDVLCLAQCLRLVRESISDEMAFLMETT
LYHLQAPEQAAERMLEDLLANDSENAIEDVRNKLQDLQNPANAMGMLLRDMDYETDVEID
QHLDLDSIFSRFCSALCSFVWYYYEFFFFFLQVFLGAGGGAQLLQLQHELMPRTAHLLSS
YYLVRWVSKCLASAIPVDTLESNLQHLSVLELSDSPTLTPFRAVSSPHTVVELFFQNVGR
KQIVSQLFSRLNVSSETSLSWPQMVASITSYLLQHLWPNNSGFLFPECLMGNCQYVQLQE
YVRLLQPWCQVNVGSCRFVLGQCYLVMGESQKALECFREAAFAVGREEFLHRLIRVEDEE
ALPTPRLQYYNKVLRLLEDTGLPELVIQLATIALTESDRDWKSQAALRTRIFKHHLDLGH
NTQAYEALTQNPDPSSFVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEY
GMRLGREVRTRRGLQKQVNCYLAAINCLRLIRPEYAWIVQPASGGVYERPGASPKRSHDG
DYTAMPTNQKIEILELKDLEREYKIAQTRLTLAHHDPTSAAIAGNASAEEMVALLVQAGL
FDTAVSLCQTFKLSLNPVFEGLTFKCIKLQCGGEAVQTQAWDWLAANQLSSVVTTKESSA
ADEAWRLLSSFLDRYQSQNSQYHRCVINKLLSHGISLPSWLINSYKEVDAAGLLRLYLNY
DLLEEAVELALEFVDALLGRGHQYFGIEKPLSATAPLVWLPYSAIDQLLQALGENQISSH
STQLFHKLQSKLDDYYIQVERATRDFSHHPRRH
NT seq 3702 nt   +upstreamnt  +downstreamnt
atggcggcggcggtggcggaggccgagaggagcttcagcgagatctgcagcgtggagcgg
gagagcggcgtgaagtatcgggacataactatcgatatcgggatttcttctggagatacc
ctgcagttagtagaagagtctctggacagcaacctattaaacaatgctgtgcggctgaag
atagtaaactgtaacgtgttgccggggggagtgtgggtcagcgagacgcgcagccacgtt
gccattctctttctgaccaatcagacggtgcacagactgatactgccacatccatgccgc
atatacaggagtgagctggtgacggagcttcagatacagtcgatctttacagacatcgga
agggtgaatttcagagacccttccaatagctctctgattccggtaagccctgggctggcc
cctggttccagtacttcgacagcctggctcaccagtgagggagaagccctgtttgctgtt
ccttctgcttctgggggaattttagttgtcaaactccctcctcatgatgttcagggtgtg
gtgtcggtgttagaactgaaacagagctcagtggtacagaggttacttacaggatggatg
ccaactgctattagaggcgatcagggcccctcggatcttcccatcagtctctgcgttcac
tgcctggaacatgatgcctttctctttgctctgtgccaggatcataaactccgaatgtgg
tcctacaaggaccagctctgcttgatggtgtgggacatgctggagtacatacctgtgaat
cgggatctgaggcacaccttggggtcaggacaccggttacgactcgccttttcaccttcc
actggcctttatctcggggtctacctacacgcgccaaggagagggcagttctgtgttttc
cagttggtgagtgtagaacagagcagatacagcctggatcacatctcctccctctatgcg
tctcaggagatgcttgttgattttgctttgacgccaacagatgtctgggcactgtggcaa
gatgaagagaatcagaccatcgtgaaatacatcaatttcgagcaagggtgttccctccag
gaagcctacctggaagttctcttctctcctggccgattcacggtttctgctttgcttaaa
gccctgcagattttccgccgtggcactgagaggatctttgatctgagttgggacaccttg
aggaaagaagtaacgctggctgtggaaaatgagcttcggaagggttatatatctttcctg
gtgccttgctcccttgtggatcacctttacctctcgtcagatgaacacctacagactgag
gatgaaacggccattgcagacgatctgggtgtaggccgcgatgttctctgcttggctcag
tgtttgcgattggtaagagagtccatctcggacgaaatggcatttctgatggagaccacg
ctttatcatctccaggccccggagcaggcagcggagcgcatgctggaagacctgcttgct
aatgacagtgaaaatgcaattgaagatgttcggaataaactgcaggatcttcaaaaccca
gccaacgcaatgggaatgttacttcgggacatggattatgaaactgatgtggaaattgac
cagcaccttgacctagacagcatctttagtagattctgctctgccctgtgttcgtttgtt
tggtattactatgagtttttttttttttttttgcaggttttcttgggagcagggggcggc
gctcagctgctgcagttacagcatgaactgatgccccgaactgcccacctcctctcctcg
tattaccttgtgaggtgggtcagtaagtgcttggcctcagctattcctgtggacactctt
gagtcaaacctgcagcatctgtcggtactggagctctcggactctccgactctaactccc
tttagagcagtgtcaagtcctcacacagtggtggagctgttcttccagaacgtgggcagg
aagcagattgtttcccagcttttctccaggctgaacgtgtcgagcgaaaccagcttgagc
tggccgcagatggtcgccagcatcaccagctacctcttgcagcacctatggcccaataac
tctggctttctctttcccgaatgtttgatgggaaactgccagtacgtgcagttacaggag
tatgtgcgtctgctgcagccctggtgtcaggtgaatgtgggctcctgccggtttgtgttg
gggcagtgctacctcgtcatgggagaaagccaaaaggcgttggagtgtttccgtgaagca
gcttttgctgtgggcagggaggagtttttacatcgactgatcagagtggaggatgaagag
gctttacccacaccccgactacagtactacaataaggtgctgcgtttgctggaggatacg
ggcctgcccgaactagttattcagctggctaccattgctttaactgaatcagacagagat
tggaaaagccaggctgcccttcggacccgaattttcaaacaccacctggacctgggccat
aacacccaggcatatgaggcgctgacacagaatcccgatcccagcagttttgtggttggt
ataatagagtctcgtgcccgtgctgtggacctgatgacccacaattactacgagctcctg
tatgctttccatatttaccggcacaactaccggaaagctggcactgtgatgttcgaatac
ggcatgcgtcttggcagggaagtccggactcgcaggggacttcagaaacaagtcaactgt
tacctggcagccattaactgtttgcgtttaattcggccggagtatgcatggatagtccaa
ccagcatctggaggagtgtatgagcgtcctggtgcatcgccaaaacgaagccatgatgga
gactacactgccatgccaacaaatcaaaagattgagattctggagctgaaggatttggag
agagagtacaagattgcccaaacccgcctcacactggcacaccatgatcctacttccgca
gcaattgcaggaaatgcctctgcggaggagatggtggctctcctagttcaggcagggctc
tttgacacagccgtctctctctgccagacttttaaactctccctcaatcccgttttcgag
ggcctcacttttaagtgtattaagttacagtgtggaggggaggcagtgcagacacaggcc
tgggactggcttgcagctaaccagctgtcctctgttgttaccaccaaggagtccagcgca
gctgatgaagcttggcgcctgttgtcatcctttttggatcggtaccaatcccagaattct
cagtaccatcgttgtgtcatcaacaagctgctgtcccatggaatctcattgcccagctgg
cttatcaacagctacaaggaagtggatgctgctggtttgctccgcctctacttgaactac
gacctgttagaggaagcagtggaattggcgctggagtttgtggatgccctgctgggcaga
ggacaccagtactttggcattgagaaacctctgtcagcaactgctccccttgtgtggctc
ccttattctgctattgaccagctactgcaggcactaggggaaaaccagatcagttcacac
agcacccagttgtttcacaagctccagagcaagttagatgattattacatccaggtggaa
cgagcaacccgtgacttctctcatcaccccagacggcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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