KEGG   Latimeria chalumnae (coelacanth): 102365756
Entry
102365756         CDS       T02913                                 
Name
(RefSeq) putative RNA exonuclease NEF-sp
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102365756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102365756
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    102365756
SSDB
Motif
Pfam: RRM_1 DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 102365756
NCBI-ProteinID: XP_005999678
Ensembl: ENSLACG00000001758
Position
Un
AA seq 636 aa
MEKKQCYVELKNSPIVQKYGCKRRGLSGYLLSEEEMRQQNYPLADSPSCEKFVPTGCDGR
VTDGSPLFGLDCEMCLTPKGHELTRVAVVNSEGTCIMNELVKPENPIFDYLTRYSGITWN
ILLPVTTRLRDVQVQLKKLLPSDAVLVGHSLENDLTALQMIHPHIIDTSLLFTRDLGRRF
KLKFLAEAVLGKKIQCEAGNGHDPAEDAKAALELAQYFIKQGPQKVAELTLEALLAAERK
RGVSQTLTNSQGLDLHTDLHGSKPLDQHIGSLDQPDDDSVSSVQDKCSLLDALHSIGRKV
ILLSEREESGDPVSAVTVNRIKCSSNREVLKRARDEVPSCCFSAVQFSLDPLYERTSISE
KMRRVLARMCTVRAGPLHKSFSLKSVKMMFRRCGPVRSVSVITEMERLYVCVQYKVLEGA
QLATETLNGVPVDGHCIKVQRPMSEDTMLECDAVLQALEGDLESAGVLYVSGIRKCLAEE
DLQEKFSPFGKIKAIVLPRKETGRHQKYCFIKYENPASVNAAVNGHLDESGRMKRRKALT
PGHISAWSTQFDQSPACPALLNSKSVACSASQGTEEPIHVAEETGDSLKELGDVMRSLDR
KVKKLFKVLTAKTLCVVLLTGTDRLPGLGLIGIKED
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggagaagaagcaatgctatgttgagctgaagaacagtcctattgttcagaagtatggc
tgcaagaggagaggtctgtccgggtatttgctctcggaggaagagatgagacagcagaac
taccctctggcagactcccccagctgtgagaagtttgttccaacaggctgcgatggaaga
gtgacagacggcagtccgctgtttggtttggattgtgaaatgtgtttgacgccaaagggg
catgaactgacccgggtggccgtggtgaattccgaagggacttgtatcatgaatgagctg
gtgaaacctgaaaaccctatattcgactacctcaccaggtactcaggaatcacctggaac
attctgcttcctgttacgacgcggctacgggatgtgcaggttcagctgaagaagttgctc
cccagtgatgccgtgttggtgggccactccctagagaatgatttgacagctctgcagatg
attcatccccatattattgacacgtcgttactttttaccagagatttgggccgtaggttc
aagttgaaatttttagcagaagctgtcctaggaaagaaaattcagtgtgaggccgggaat
ggtcacgatccagctgaggatgcgaaagctgctttagaactggctcagtattttatcaag
cagggacctcagaaggttgcagagttaaccttggaagccttactggcagcagaacggaag
cgcggtgtgtctcagaccctcaccaattctcaaggcttagatctacacactgacttgcat
ggcagcaaacctttggaccagcacattggttctttggaccaaccagacgacgactcagtc
agttcggtccaagacaaatgcagcctcttagatgccctgcactccattggaaggaaagta
atcttgctgagtgaaagagaagagagtggagacccggtttctgcagtaactgtgaacaga
ataaaatgcagctcaaacagagaggttctaaagagagccagagatgaggttccatcttgc
tgtttcagtgctgttcaattttcgcttgaccctctttatgagaggacaagcatctccgaa
aagatgaggagagtgctggccaggatgtgcactgtgcgtgccggccctttacacaagagc
ttctccctgaagtcggtgaagatgatgttcaggcgatgtggcccggttcggtctgtcagt
gtcatcacagaaatggagcggctgtatgtctgtgttcagtacaaggtgctcgaaggcgcc
cagctagccacggagacactaaatggagttcctgtagacggacattgtataaaggtccag
agacccatgagcgaagacaccatgctggagtgcgacgcagtgttgcaggcgctagaggga
gatttggaaagcgctggtgttctgtatgtgtctgggatcaggaagtgcctggcagaggag
gacctgcaggagaaattcagcccatttgggaagatcaaagctattgttttaccaagaaag
gagactggcaggcatcagaaatactgctttataaaatatgagaaccctgcgagcgtcaac
gctgctgtgaatggacatctggacgaaagcggtcgaatgaagagaaggaaagcactcact
cccggccacatctctgcctggtccacacagtttgatcagagccctgcctgtcctgcttta
ctcaactccaagagcgtggcctgttctgcctctcaagggacagaggagcccatacacgtt
gcagaggagactggagactccctaaaggaacttggagatgtcatgagatctctagaccga
aaagtcaaaaagttgttcaaggtgctgacagcaaaaacgctgtgtgttgtgctgctcacc
ggaacagacaggcttcctggcttgggcctgattggaataaaggaagattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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