KEGG   Larimichthys crocea (large yellow croaker): 104919456
Entry
104919456         CDS       T04659                                 
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2 isoform X1
  KO
K08618  a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:3.4.24.14]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lco01002]
    104919456
Enzymes [BR:lco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.14  procollagen N-endopeptidase
     104919456
Peptidases and inhibitors [BR:lco01002]
 Metallo peptidases
  Family M12: astacin/adamalysin family
   104919456
SSDB
Motif
Pfam: TSP1_ADAMTS TSP_1 ADAMTS_CR_2 Reprolysin Pep_M12B_propep ADAMTS_spacer1 Reprolysin_5 Reprolysin_3 ADAMTS_CR_3 Reprolysin_2 TSP1_spondin Reprolysin_4 PLAC Peptidase_M10 DUF4953
Other DBs
NCBI-GeneID: 104919456
NCBI-ProteinID: XP_027129577
Position
XXII:17933007..17957071
AA seq 1426 aa
MDEFCYGFMIIVFLLPINCLHSVYITDNTDSLHQVLSEFSVVRPIRTNLEGRFLSASVSA
HHLHPNKRYAHSAEDLITDTNKVRKKRQTQTDTSHQTPPIDISPPNQTGHSWMGLAEEEE
ELFYNVTVFGQDLHLRLRPNSRLVAPAATMEWWEESGHKHSEPIEDTRCFYTGEVSNMED
TSVAVSNCDGLAGMIRMGQEEFFIEPLDRRWTGEEEEEGEAEEGEEEGGRRHIVYRSSSI
IKTQLAVNQSQGVNQTADDFLRGPLLGSFNLNQNVLGSRSDSVRRRRYIEEAELFNIEVL
LAVDYSVLLFHGRDHIQKYLLTLMNIVNEIYQDHSLGANINVVLVRIIMLSPSKSQEMIS
VGNPQKSLENVCGWSYLQQREQNHAEQHDHTIYLTRQEFGPSGMQGYAPVTGMCQLHRSC
VLVIEDGFSSAFVAAHETGHVLGMEHDGEANDCADDVSLGSIMSPRVQATFHRYHWSRCS
WRELHKYLNTYDCLRDDPFNHDWPALPQLPGFQYSMDQQCRFDFGPGYSLCTAYATHDPC
KQLWCADYNNPFYCKTKKGPPLDGTKCGPGRHCFKGFCMKLTPDLLRQDGSWGTWTPFGS
CSRTCGGGVRFRSRSCDNPAPANGGRTCFGNSFEFQMCNQEECPPLTDFREDQCKVWNPF
YEHEGLKHHWLPYQHPDSDERCRLYCQSKETAAVVSMNRMVHDGTPCSYSDAHSVCVRGE
CEHVGCDGQIASDQQEDRCGVCGGDNSSCKLIKGNFTRSTKKQGYLKILEIPKGARHLLI
QEFKGTPHILAVKNQETGHLFLNDEDELPESRVVIEKGVAWEYINTVEQESLQTTGPLKY
GALLMVRSHGDSKVTVSYKYIIQDRLRSPTESNLVEDAIFYEWALKKWSHCSKPCGGGKQ
YTRFGCRRKADGKMVHRMFCANINKPRAISRNCNTNTCISPRWVTGEWEECSATCGQTGW
QRRWVSCQQTPSTDQQQQQQRSVHSTLCGEDRPEGKQTCNRFPCPASWRTGPWTPCSVSC
GNGTQERQVACSSPEGSGRNCSDPRPITTRTCQALACNGDRKKPIIQILSRFNASFPAPN
ISRQRCRGDRSVFCRMEVLNRYCSIPGYRQMCCKSCSQGNSSINSNSSNSSNSSNFNFSS
TNLPTSNSSSWSVTTEMMTSASTPSWSDSSYIVNNIISTPPLIVTPPPTPRSSTDFVYVE
YDDYDEYSSYEDPSIPSTAPDIIPTTTTTTTTTTTTTTTTTISTTTSTTTTTRRTRKTAP
SHLFKRKTTTATMGPATVPTVTAEGQSLTLAPVRTSAVPEFPTTTMSADPDDIITATSSP
NQTSGGQSLQTKITRTEPTPTSSSSFFSLSKKENNSVDEVPYRIVGWDTDINKGQQNYFV
PRMPPFRERTQNKRIQQLLNEKRRQDLLRRSNRSKEGRTGRRHVGL
NT seq 4281 nt   +upstreamnt  +downstreamnt
atggacgagttttgttatggatttatgattattgtgtttctgctgccgatcaactgttta
cactcagtttacatcactgacaacacagattctctccatcaggtcctgtcagagttcagt
gttgttcggccaatcaggaccaacttagaggggcgtttcctgtcagcgtctgtctccgcc
caccacctgcaccctaacaaaagatacgcccactctgcagaggacttgataactgacacc
aacaaggtcaggaaaaaaagacagactcaaacagacacatctcaccagaccccgcccata
gatatatcaccgcccaaccaaacagggcacagctggatggggctggctgaggaggaggag
gagcttttctacaatgtgacagtgttcggtcaggatctccacctgcggctgcgtccgaac
tctcgacttgttgcccccgctgccaccatggagtggtgggaggagtcaggacacaaacac
tctgagccaatagaggacacccgctgcttctacacaggagaggtgtccaacatggaggac
acatctgtcgccgttagcaactgtgatggactggctgggatgatccggatgggtcaggag
gagtttttcatcgagccgctggatcgacgatggacaggagaagaagaagaagaaggagaa
gcagaagaaggggaggaggaaggaggaagacgacacattgtttatcgttcatcatccatc
atcaagacacaactagctgtcaatcagtctcaaggtgtcaatcaaactgcagatgacttc
ctccgaggtcctcttttaggttcttttaacttgaaccaaaatgtgttggggtcaagatct
gactcagttcgacgacggcgctacattgaagaggcagaactatttaacattgaggttttg
ttagctgtggattattctgtccttcttttccacggccgagaccacattcagaaatatctt
ctgacactcatgaacatagttaatgagatctatcaggaccattcgctgggtgccaacatc
aatgttgttttggtcagaatcatcatgttgtctccatcaaagtctcaggagatgatatct
gtggggaatccccagaagagtttggagaatgtttgtggatggtcctatctccagcagagg
gagcagaatcacgccgagcagcatgaccacaccatctacctgaccaggcaggagttcggc
ccctccggcatgcagggttatgctccagttacaggaatgtgtcaactgcatcggagttgc
gtgcttgtgattgaggacggtttttcctcagccttcgtagctgcacatgaaacaggacac
gttttagggatggagcatgatggcgaggcaaatgactgtgctgatgacgtgtcattgggc
agcatcatgtctccgcgggttcaggccaccttccaccgataccattggtccaggtgcagc
tggagggagctgcacaagtacctgaatacatatgactgtctccgtgatgacccattcaat
catgattggccagctctgcctcagttgccaggatttcagtactccatggaccaacagtgt
cgctttgactttggaccaggatacagtctctgtactgcatacgcaacccatgacccttgt
aaacagctctggtgtgccgactacaacaacccgttctactgtaagaccaagaaaggtccg
ccgctcgatgggacaaagtgtggaccgggcaggcactgctttaagggtttctgcatgaag
ttgacccctgacctcttgagacaagatggcagctggggaacatggaccccatttggcagc
tgctccaggacctgtgggggtggggtcaggtttcggtccagaagctgcgacaacccagct
ccagccaacggggggcgcacctgtttcggaaacagttttgaattccagatgtgcaaccag
gaagagtgtccaccactgaccgatttcagggaggatcagtgtaaagtctggaatccattt
tatgaacatgaaggattgaaacatcactggctgccgtaccaacaccctgactctgatgaa
cgctgtcgtctgtactgtcagtcgaaggaaacagcggccgtggtttccatgaacagaatg
gtgcatgatgggacgccatgttcttacagtgatgcccacagcgtctgcgtccgaggagag
tgtgagcatgtaggttgcgatggacagattgcttcagaccagcaggaggaccgatgtggt
gtctgtggtggagataactccagctgtaagctcatcaaaggaaacttcacccgcagcacc
aagaaacaaggttaccttaagatcctggagattcccaaaggagcgcgacacctgctgatc
caggagttcaaagggactcctcacatcctggcggtgaagaaccaggaaacaggtcacctc
ttcctcaatgatgaagatgaactcccagaatctcgagtggttatcgagaagggtgtggca
tgggagtacatcaacactgtggagcaggagtcccttcagaccacagggccactgaaatat
ggagccctgctcatggtccgttcccatggtgactccaaagtgacagtgtcttataagtac
atcatccaggaccgtctccggagcccaacggagtccaacctggtggaggacgccatcttc
tacgaatgggctctgaagaagtggtcacactgttctaaaccctgcggcggagggaaacag
tacacgagattcggctgcaggaggaaagctgatgggaaaatggttcacaggatgttctgc
gccaacatcaacaaaccgagagccatcagccgcaactgcaacaccaacacgtgcatctcg
ccacgttgggtgaccggggagtgggaggaatgcagcgccacctgtggtcagacaggatgg
caacgtcgctgggtgagttgccagcagacacccagcacggaccagcagcagcagcaacag
cgctcagtgcacagcacactctgtggtgaagaccgtccagaggggaaacaaacttgcaac
cgcttcccctgccccgcttcctggcgaactgggccctggaccccgtgttcagtatcatgt
ggaaacggaactcaggaacgccaggttgcatgttcgagtcccgaaggttcaggccgaaac
tgcagcgaccctcgaccaattacaacccgcacctgccaggccctggcctgtaatggtgac
cggaagaagccaattattcaaattctgtctaggttcaacgcatccttcccggctccaaac
atctccaggcagcgctgtcgtggtgaccgctcagtgttttgtcgaatggaagtgttgaat
cggtactgctccattcctgggtaccgtcagatgtgctgcaagtcctgcagccagggaaat
tcaagcatcaacagcaactcaagcaactcaagcaactcaagcaacttcaactttagcagc
acaaatctgccgacctccaacagcagttcgtggagtgtaaccacagagatgatgacttca
gcatccacaccctcctggtctgacagcagctacatcgtcaataacatcatcagcactcca
cctctcattgtaactccacccccgacccccaggagcagcaccgactttgtgtacgtggag
tatgatgattacgatgagtattcgtcctacgaggatccttctattccctctactgctcct
gacatcattccaacgactactactaccactactactactactactactactactactact
actatttctactactactagtactactactactacaagacgtacaagaaaaactgctcca
tctcatttattcaagaggaaaactaccacagccacaatgggccctgctacagttcccaca
gtaactgctgagggtcaaagtctaacattggcaccggtcaggacatctgccgtcccagag
ttccccaccacaacaatgtcagctgatcccgacgacatcatcactgccacatcatcacca
aaccaaacatcaggagggcagagccttcaaactaaaattacaagaactgaaccaacgcca
acatcgtcatcctcattcttctccctctccaagaaggagaacaactcagtggacgaggtc
ccgtaccggattgtagggtgggatactgacatcaacaagggacagcagaactactttgtg
ccgcggatgccgccgttccgcgagcgaacacaaaacaaacgcatccagcagcttctgaat
gagaaacgacgccaggatcttctcaggagatccaacaggagcaaagagggcaggactggc
agaagacatgttggattataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (104)   

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