KEGG T04659: 104920090

Larimichthys crocea (large yellow croaker): 104920090

Entry

104920090         CDS       T04659

Symbol

nefm

Name

(RefSeq) neurofilament medium polypeptide

K04573

neurofilament medium polypeptide (neurofilament 3)

Organism

lco Larimichthys crocea (large yellow croaker)

Brite

KEGG Orthology (KO) [BR:lco00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lco04812]
    104920090 (nefm)
Cytoskeleton proteins [BR:lco04812]
Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     104920090 (nefm)

SSDB

Motif

Pfam:

Filament Filament_head Tup_N FeoC

Other DBs

NCBI-GeneID:

104920090

NCBI-ProteinID:

XP_010730547

Position

IV:complement(175012..179802)

AA seq 919 aa
MSYPVDTIGSPFRRNMDTRPTSYGYSRSIGTPSSGFRSQSWSRASPGSTMTTSYKRTVNM
PVSRAYSSTVLSSADSVDYGQTILNGDYKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNKQ
IEAEIQALRQNQVSRSQLGDHYDQELQELRSMLEQIHHEKAQVQLDTDHIEEDIQRLRDR
FDEEARIREETEAIIRVLKKDTTDSELVKSELEKKVQSLQDEIAFIRNNHEEEVSDLIAQ
IQASQVTVERKDLQKADITEALREIRCELEGHSNQNLQQVENWFMCRYAKLTEAAEQNKD
AIKSARDEISDYRRQLQSKTVELESVRGTRDSLERQLNDIEDRHNSDLASLQETIHQLDN
ELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTSTKKSK
SEPPKLKVQHKFVEEIIEETRVEDDKSDIDEALAEIAQELSATLGDGAEAEEEQGEDAEE
GEGEEAEGEGEEAEAEGEEEEVVAATEAKVSSSAPTKEEEEEDDGKGDEEEEGEGGDEGE
KEEEGEGEDEGEKGDDAEGEGGDEGEGEEEEEEEVEETVLCSKAPESKASPDKEKAGDKE
GSGGEEEATAEEEGGDQEEDGGDEADEKEDADKAKKEDSEKDETVKEEKDDKSEEVVAKT
EAPKTEAAKPETKKEEAPKAESPKPGSPKSESPKPGSPKSESPKPTSPKSESPKEGSPKA
GSPKPSSPKAESPKSESPKPESPKAESPKAESPKAESPKPESPKAESPKPESPKAESPKT
ETAKPEAPKAAEEKSEKKSDSTDDKKVEKKDAAMNGEIDKSSPEEKEKKDEEKETDVIAN
GMDESPVKEDGSQKVVITKTVETITTGEDGSKHVTKSVTVTETVKEVEEVEEVMQEKLVS
TKKTEKHSTQSIKQVTEAD

NT seq 2760 nt +upstreamnt +downstreamnt
atgagttacccggtggacacgatagggagccccttcaggagaaatatggatacaaggccg
accagctacggctacagccgctccatcggcaccccctccagcggcttccgctcccagtct
tggtcccgggcaagccccggctccaccatgaccacctcttacaagaggaccgtgaatatg
ccggtgtcccgagcatacagctcaacggtgctcagctccgccgacagcgttgattatggt
caaaccatcctgaacggagactacaagcgatctaacgagaaagagcaactccaagggctc
aacgaccggtttgttgtttacattgacaaggtgcactacctggagcagcagaacaagcag
atcgaggcggagatccaggcactgcggcagaatcaggtgtcgcgctcccagctgggcgac
cactacgaccaggagctgcaggagctgcgctccatgctggagcagatccaccatgaaaag
gcgcaagttcagctcgacactgaccacatcgaagaggacatccagcggcttagggaccgc
tttgacgaagaggctcgcatccgtgaggagacagaggccataatccgcgtcctgaagaag
gacacgaccgactcggagttggtgaagtccgagttggagaagaaagttcagtcgctgcag
gatgagatcgccttcatccgcaacaatcacgaggaagaggtgagcgatctcatcgcccag
attcaggcgtctcaggtgaccgtggagaggaaagacctccagaaggcagacatcaccgag
gcgctccgggagatccgctgcgagctggagggccactccaaccagaacctgcagcaggtg
gagaactggttcatgtgccgctacgccaagctcactgaggctgcggagcagaacaaggat
gccataaagtccgcccgtgatgagatatccgactaccgccgccagctgcagtccaagacg
gtggagttggagtctgtccgcggaacaagagactcgctggagaggcagctgaatgacatc
gaggaccgccacaacagcgatctggccagcctgcaggagacgattcaccagctggataat
gagcttaagagcactaaatgggagatggctcgtcacctgcgcgagtaccaggacctgctc
aatgtcaagatggcattggacattgagattgctgcatataggaaactccttgaaggtgaa
gagacccactttagcactttcccttatcgccaggctgtcacctccaccaaaaagtctaaa
tcagaacctcctaagcttaaagtgcagcacaagtttgtggaggagatcatcgaggagaca
agggtagaggacgacaagtctgacattgacgaggccctggcagagatagcacaagagctg
tctgctacactcggagatggtgcagaggcagaggaggagcagggagaagacgcagaagag
ggagagggagaggaagcagaaggcgagggagaagaggcggaggctgagggcgaggaggag
gaagttgtagccgccaccgaagccaaagttagctctagcgcacccactaaagaggaagag
gaggaagatgacggaaaaggtgatgaggaagaagagggagaaggtggtgatgaaggagag
aaggaagaagaaggtgagggagaggatgagggagaaaagggtgatgatgcagagggagaa
ggtggtgatgaaggagaaggagaagaggaagaagaggaggaagttgaggagacagtattg
tgctccaaagccccagagtctaaagcctctcctgacaaagagaaggccggagacaaagaa
ggcagtggaggagaggaggaagccaccgctgaagaggagggtggcgatcaggaagaagat
ggcggagatgaggcagatgaaaaagaggatgcagataaagccaagaaggaggacagtgaa
aaagacgagacggtgaaggaagagaaagatgacaaatcagaagaagttgtagccaagaca
gaagctcccaaaacagaagctgcaaagcccgagaccaagaaggaagaggctcccaaagca
gagtccccaaagcctggttcccccaagtctgaatcccctaaacctggttctcctaaatct
gaatctcccaagcccacatctccaaagtctgagtcccccaaagaaggctcaccaaaggct
ggatccccaaaacccagctcaccaaaagctgagtcccctaagtcagaatccccaaaacct
gaatccccaaaagctgaatccccaaaagctgagtctccaaaagctgaatcccccaaaccc
gaatctccaaaagctgaatctcccaaacccgaatctccaaaagctgaatccccaaagaca
gagaccgccaagcctgaggcccctaaagctgctgaagagaaatcagagaaaaagagcgac
tcaacagatgacaagaaggtcgaaaagaaggatgctgccatgaatggcgagatagataag
agcagcccagaagagaaggagaagaaagatgaggagaaagaaaccgatgtgatcgccaac
ggcatggacgagagccccgtcaaggaagatggcagccagaaagtggtcatcaccaaaact
gtggagaccatcaccactggagaggacggatccaagcacgtcaccaaatcagtcactgtg
accgagacagtgaaggaggtggaagaagtagaggaggtgatgcaggagaaactggtgtcc
accaagaagactgagaagcactccacccagtccatcaagcaggtgaccgaggccgactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (122)   
   KEGG ORTHOLOGY (1)   
   RefGene (118)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (131)   

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