KEGG   Larimichthys crocea (large yellow croaker): 104923118
Entry
104923118         CDS       T04659                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04137  Mitophagy - animal
lco04144  Endocytosis
lco04145  Phagosome
lco04148  Efferocytosis
lco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104923118
   04145 Phagosome
    104923118
   04137 Mitophagy - animal
    104923118
   04148 Efferocytosis
    104923118
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104923118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104923118
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104923118
   04031 GTP-binding proteins [BR:lco04031]
    104923118
Membrane trafficking [BR:lco04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    104923118
 Endosome - Lysosome transport
    104923118
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104923118
  Exosomal proteins of other body fluids (saliva and urine)
   104923118
  Exosomal proteins of colorectal cancer cells
   104923118
  Exosomal proteins of bladder cancer cells
   104923118
GTP-binding proteins [BR:lco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    104923118
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 104923118
NCBI-ProteinID: XP_010734417
UniProt: A0A6G0HS60
Position
XIII:complement(39761319..39768651)
AA seq 216 aa
MANRGGASRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQVAGASSGRNRGVDLTEAAQPAKAPCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaatcggggaggcgcttcgagacccaatggacccaatgcagggaacaagatctgt
cagtttaagctggtgctgttgggcgagtcagccgttgggaagtccagcttagtgctgcga
ttcgtcaagggtcagttccatgaattccaagagagcacaataggagcggcctttctcact
cagacagtgtgtctagatgacacaacggtgaagtttgaaatctgggacactgcaggtcag
gagcgttaccacagtttggcccccatgtattacagaggagcacaggccgccatcgtggtc
tacgacatcacaaacgaggaatcctttgcacgggcaaagaactgggtgaaggagctgcaa
agacaagctagccctaatatagtcatcgctttgtcaggcaacaaggctgacctagccaac
aagagagccgtcgacttccaggacgcccagtcctacgcagatgacaacagcttacttttc
atggagacgtcggccaagacatctatgaatgtgaatgagatatttatggctattgcaaag
agattgccgaagagtgagcctcaggttgcaggagccagcagcgggcggaacaggggagtg
gacctgacagaagctgcccagccagccaaggctccatgctgcagtaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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