KEGG   Larimichthys crocea (large yellow croaker): 104928608
Entry
104928608         CDS       T04659                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04145  Phagosome
lco04210  Apoptosis
lco04530  Tight junction
lco04540  Gap junction
lco04814  Motor proteins
lco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104928608
  09143 Cell growth and death
   04210 Apoptosis
    104928608
  09144 Cellular community - eukaryotes
   04530 Tight junction
    104928608
   04540 Gap junction
    104928608
  09142 Cell motility
   04814 Motor proteins
    104928608
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104928608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104928608
   03036 Chromosome and associated proteins [BR:lco03036]
    104928608
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lco04812]
    104928608
   04147 Exosome [BR:lco04147]
    104928608
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104928608
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     104928608
Cytoskeleton proteins [BR:lco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    104928608
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104928608
  Exosomal proteins of other body fluids (saliva and urine)
   104928608
  Exosomal proteins of colorectal cancer cells
   104928608
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 104928608
NCBI-ProteinID: XP_019111004
Position
XVIII:10706576..10709806
AA seq 450 aa
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSMGEEDEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcacgtcggccaagccggagcccagatgggcaacgcatgc
tgggagctgtactgcctggaacatgggatccagccagacggacagatgcccagtgacaag
actattgggggaggagatgactccttcaataccttcttcagtgagactggggcaggaaag
catgtccccagggccatctttgttgacctggaacctactgtcatcgatgaggtgcgtaca
ggaacttaccggcaactgttccaccctgagcagctgattacaggaaaagaggatgctgcc
aacaactacgcccgtggccactacacaatcggcaaggaaattattgatctggttctggac
cggactcgtaaactggctgatcagtgcactggcctgcagggattcctcatcttccactcc
tttggtggaggcactggctcaggtttcacctcccttctgatggagagactttccgttgat
tatggaaagaaatcaaaacttgaatttgctgtctatccagccccccaggtctccacagca
gtggtggagccttataactccatcctgaccacccacaccaccctggagcactctgactgt
gctttcatggtggacaatgaggccatctacgatatctgccgcaggaaccttgatatcgag
aggccgacttacactaatctgaacaggctcattggccagattgtgtcttcaatcacagcc
tcccttcgctttgatggtgccctgaatgttgatctgacagagttccagaccaacttggtg
ccctaccctcgtatccacttcccactggccacctatgctccagtcatctctgctgagaaa
gcttaccatgagcagctgtctgttgctgatatcaccaatgcttgttttgagccagctaat
cagatggtgaagtgtgaccctcgtcatggtaaatacatggcctgctgtctgctgtatcgt
ggtgatgtggtacccaaagatgtcaactctgccatcgcagccatcaaaaccaaacgcacc
atccagtttgtggactggtgccccacaggcttcaaagtgggcatcaactaccagccacca
acagtggttcctggaggagacctggctaaagtgcagagagctgtgtgcatgctgagcaac
accacggccatcgctgaggcctgggcccgtcttgaccacaagtttgacctcatgtatgcc
aagagggcctttgtccactggtatgttggagagggcatggaggagggagagttctcagag
gccagagaagatatggctgccctggagaaggattatgaagaggttggcactgatagcatg
ggcgaggaggatgaagagggcgaggaatattga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (260)   
   KEGG ORTHOLOGY (1)   
   RefGene (256)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (277)   

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