KEGG   Larimichthys crocea (large yellow croaker): 104929630
Entry
104929630         CDS       T04659                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
Organism
lco  Larimichthys crocea (large yellow croaker)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 U-box zf-RING_10 zf-RING_5 DUF4988 CYP38_PsbQ-like FYDLN_acid TRAF3_RING RNase_P_Rpp14 Spc29 Mt_ATP-synt_D
Other DBs
NCBI-GeneID: 104929630
NCBI-ProteinID: XP_010742502
Position
V:1820656..1823298
AA seq 547 aa
MSAASSLLSEDQFLCSICLDVFTDPVSTPCGHNFCKKCITTNWDLNFPCQCPNCKKTFNT
RPELQVNTFISEMVAHFRKSAEQKTGSSSEKQAVQAGEVPCDVCTGTKLKALKSCLVCLV
SYCETHLEPHVTMPGLKRHQLIDPVTNLESRMCTKHDKLLELFCKDDQTCVCMLCTISEH
KVHEVVPLEEEYEGKKAELGKKGAELLQMIQERQLKIEELKRSVEVSWENAYGEIKAGVC
AFTKLKYIIQRNQTKVIEMIEEKHKTTEKQADGFIKELQEEISELKKKSAELEQVSHSED
HCNLLQNFPSLNAAPPTKDWKEVRVHLPSYDGSVRTTVAQLVEMVENEMKKLFPKADLKT
AQQSAVEVTLDPDTANPELILSEDGKQVHHGNTKRNLPNNPERFSYCACVLGKPIDYSGR
FYFEVQVKGKTQWVVGVAKESVNRKGRISINHKNGYWTVCLSKETVYCASTDPPVRLPLK
AKLEKVGVFVDYEQGLVFFYDVNAADLIYAFTGCSFTEKLLPLFCPSFNQGGKNSAPLII
CPVNPTK
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgtctgctgccagcagtttgctgtctgaggatcagtttctgtgctccatctgtctggat
gtgttcactgatccagtcagcacaccatgtggacacaacttctgcaaaaaatgcatcact
acgaactgggatcttaatttcccgtgtcagtgtcccaactgtaaaaagacttttaacaca
agacctgagctgcaggtcaatactttcatctctgagatggttgctcactttagaaagtcg
gctgaacagaaaactggcagcagctcagagaaacaagctgtccaagcaggagaagttccc
tgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtc
tcctactgtgagactcacctggagcctcatgtgacaatgccaggcctgaaaagacatcag
ctgatcgaccctgtgactaatctagaaagccggatgtgtaccaagcacgataaactgctg
gagctgttctgcaaggatgatcagacatgtgtttgcatgctctgtaccatttcagagcac
aaggtgcatgaagttgttcctctagaagaagaatatgagggaaagaaggccgagctgggg
aagaaaggggctgaacttctgcagatgatccaagagagacaactgaaaattgaagagctc
aaacgttctgtcgaggtgagctgggaaaacgcatacggagagataaaagccggtgtttgt
gccttcaccaagttgaaatacattattcagagaaaccagaccaaagtcattgagatgatt
gaggaaaagcacaaaacaacagagaaacaggctgatggcttcatcaaagagctgcaagag
gaaatctctgagctgaagaagaaaagcgctgagctggagcaggtctcacactctgaagat
cactgtaaccttctccaaaacttcccgtccctgaatgctgctccacccaccaaggactgg
aaagaggtcagagtccaccttccatcgtatgacgggagtgtgaggacaactgtcgctcag
ctggtggagatggtcgaaaatgagatgaagaagctgttcccaaaggctgatctgaagacc
gcccagcagtctgcggtggaagtgaccctcgatcctgatacagcaaatcctgaactcatc
ctgtctgaagacgggaagcaagtacatcacggtaacacaaagaggaacctcccaaataac
ccagagagattttcttactgtgcctgcgtcttagggaagccgatagattattcaggaaga
ttctacttcgaggttcaggttaaaggaaagactcagtgggttgtaggagttgccaaagag
tcagtcaacagaaaggggcgcatcagtattaatcacaagaacggttattggactgtatgt
ttgagtaaagaaactgtgtactgcgcttccactgaccctcctgtccgtctccctctgaag
gcaaagctggagaaggtgggggtttttgtggattacgagcagggtctggtcttcttttat
gacgttaatgctgcagatcttatctacgccttcactggatgctctttcactgaaaaactc
ctcccgttattctgcccctctttcaatcaggggggtaaaaactctgcccctctgatcatc
tgtcctgtcaatcccacaaaatag

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Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (41)   

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