KEGG   Larimichthys crocea (large yellow croaker): 104933941
Entry
104933941         CDS       T04659                                 
Name
(RefSeq) ATP-binding cassette sub-family A member 1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco02010  ABC transporters
lco04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    104933941
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104933941
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lco02000]
    104933941
Transporters [BR:lco02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    104933941
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23 AAA_29 MukB
Other DBs
NCBI-GeneID: 104933941
NCBI-ProteinID: XP_027133809
Position
III:9166359..9318433
AA seq 2239 aa
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVLWPLFLFFILVWVRSTNKPFYKGQCHYPNKA
MPSAGVLPWLQGMMCDIDNPCLSYPTPGETPGQVNNFNNSIISGMLIELQVLVANRSILS
KAQLLADAIDQWNSVLSQSTPGDSKPVILRSILRDNETFSTHLEENLSVPPRVVQSLMNA
EVKLSSMMDIPRPGNLKSILCEGTDLAQYVQFNSQAEKEAFQNVSCSLTPQQLINTRRVF
LQNLDPRKVLSELPLDLNATDRATLMKLTQDALPVIEEMARLRNSVAFKAVSTLDFQRDM
FGSINKLLCDKEPDFNSTRMHVSSRSQQMANNKAIFIMGNSSDAFCQTLVDTLEGTPGLR
YIWSTFKPLLQGKVLYTPDTPAAHLIVKEANSTFSALATLKELADSWDELGPRVWEFMQN
SPQVNRMRELLANPVFAAVLNQRLKSTGWTAELLANFLYNGPPEDRPPGMPPRDWRNVYN
TTTEILQLLSKFLGCLDLNKFEAAPTEGHLVTKALELLNNDTFWAGIVFENLQPNSSQLP
PYVKYKIRMDIDDVERTRKVKERSWSPGARDNPFNDLRYIWGGFSYLQDMMDHGIIRLQT
SKTQPLGIFAQQMPYPCFVDDSFIQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRLKE
VLRAVGIQNGALWSATFIENIVLLTIPCGLISVMVKFGKVLQYSDPSVIFVFLLVFCLAT
ITQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWSDVMGFGAKVAVSLLSCVAFGY
GCENFAKYEQQGIGIQWYNINKSPEDGERYTFLVSIIMMLIDATLHWVLTWYIENIFPGQ
YGIPKPWYFPFTVSYWSGKPSVTNADPDLLKDTIVHSEYLEKPPPNMKAGVSIRNLVKIY
KTGKKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIHVDM
DSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSSKEVKIEMDQMIEDVGLPHKRKDL
AKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPFARRSIWELLLKYKQGRTIILSTH
HMDEADILGDRIAIISHGKMRCCGSSIFLKKCFGSGYYLTLVREGIEKMTAQRNGIIHSQ
AKEEKDYPSRRSSLDDGIGSQTWSNSDPSDLTAVGQLVRRHVPEAAFLESIGQEITYILP
YTGARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEMNTTKELLV
RDCKRSSCASKRNSIASVHIKTEQVSGMSELKFTSKVEDLKKNASVSGKGSTVITGWKLI
RRQFLALFIKRFHYARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPKLELQPWMYG
LPQTTFFSNDLPDNVEVSQVVKTMVNAPGFGTRCMNGNPIPKLPCSSSGSDWFTPSVDQS
ITDIFLNGNWSMSNPSPNCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDTLLDLTGRN
MTDFLIKTFENSGKTRYGGISVGAINSQVRLNEAAIEAAFRDLKDLFSSLQDNVTDQILP
KAETLLKKLGTRDNVKVWFYNQAWHGMPSFLSVAGNAILRGNLPAGKDPRQYGISVSNHP
LNLTKEQLSYAAMATSSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNP
AVYWLANFAWDMCNYVVPCLIVIVIFLCFQQKAYVSPPNLPALILLLVMYGWSITPMMYP
ASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDENVSHINEIVKQVLLIFPHFCL
GRGLIDMAKNQAMAILYSGFGEDRFEDPLSWDMVGKNLCAMSIQGTVMFAITILIQYKFF
CKPRLISGKSLSAEEEDIDVARERERVYEGKAHKDLLRICDLTKVYSRKSTPAVDRLCVG
VPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFVNGYSIRTEMRDVHQNLGYCPQFD
AIDELLTGKEHLEFYARLRGVPEDEVTMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLST
AIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCTRMA
IMVNGRFKCFGSIQHLKNRFGDGYTVIVRVGGSPPALKPVEDFVQQTFPGSVLKEKHHNT
LQYQLPRTQGALANIFGQFTSHQQRLSVEDYSVSQTTLDQVFVNFARHKPEEDDSQSYDN
RVDTSDELPLEAMKSSQEA
NT seq 6720 nt   +upstreamnt  +downstreamnt
atgggtctcctgacacagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgtagaagtgctatggcccctgtttctcttcttcatactggtg
tgggtgcgctccaccaacaagccattttacaaaggccaatgtcactacccaaataaagcc
atgccatccgccggcgtgcttccctggcttcaaggcatgatgtgtgacatcgacaatccc
tgtttgagctatccaacaccgggggagacgcctggccaagtgaataacttcaacaactct
ataatttccgggatgttgatagagctgcaagtccttgtggcgaacagatctattctcagt
aaagcacagttgctagcagatgccatcgaccagtggaattcagtcctgtcacagtctacc
cctggtgatagtaaaccagtgatcctcaggagtattctaagagacaatgagactttctcc
actcatctggaggagaatttgtctgtgccaccaagagtggtccaaagcctcatgaatgct
gaggttaaactcagttcaatgatggacatcccgaggccaggcaacctcaagagcatctta
tgtgaggggacagatctggctcagtatgtccaatttaacagccaagctgagaaagaagct
tttcaaaatgtcagctgctccctcactccacagcagctgattaacacccgacgagtattc
ctgcaaaacctggatccgaggaaagtgctttctgagttacctttggatctgaatgctaca
gacagggcgacattgatgaaactcacccaagatgcgttaccagtgatcgaggagatggcc
aggttgaggaactctgtggccttcaaagctgttagcacactggatttccaaagggacatg
tttggcagtatcaataagcttctgtgtgataaggagcctgacttcaattccaccagaatg
cacgtcagttcacgctcacaacagatggctaacaacaaggcaatcttcattatgggcaac
agttccgatgctttttgtcagactctcgtcgacaccctggagggcacacctggcctgcgc
tacatttggagcaccttcaagccgttattgcaagggaaagtcctctacacacccgataca
cctgctgctcacctcatcgtgaaagaggcaaatagcacattcagcgccttggctacgctc
aaagagctggctgattcgtgggatgaactcgggccacgtgtctgggaattcatgcaaaac
agccctcaagtcaatcgaatgcgggaactgctggcgaatccagtatttgctgctgtcctc
aaccagcgtctcaaaagcacagggtggacagctgagcttctggccaacttcctctacaac
gggccccctgaggatcgtccacctggcatgccaccccgcgactggcgcaatgtttacaac
accactaccgaaatcctgcagctcctctccaaattcctcggttgtttagacctgaataag
tttgaggcggcccccactgaaggccatctggtgacaaaggctctggagcttctgaataat
gatacattctgggctggtattgtcttcgaaaacctccaaccaaactccagccaactccct
ccttatgtcaaatacaagattcgtatggacatcgatgacgttgagcgtaccagaaaagtg
aaagagaggtcatggtctcccggggcccgagacaacccctttaacgacctgcgctatata
tggggaggcttctcctacctgcaggatatgatggaccacggcattatacgactgcaaacg
tcaaagacccaaccccttggtatttttgcccagcaaatgccatacccttgctttgtggat
gacagcttcatccagagtattggaggcatcctccccatgttcctcgtactggccttcatg
tacactgtgtgcatgaccatcaaaggcctggtgctggagaaggaactccggctcaaggaa
gtactacgtgctgttggcattcaaaacggtgctctttggtctgcgacgttcatagaaaac
attgttctgctcacaattccctgtgggctcataagtgtcatggttaagtttggcaaagtg
ctgcaatacagcgacccctcagtaatctttgtcttcctgctggtgttctgcctggccacc
atcactcagtgcttcttcattagcgtcttcttctctaaggccaacttagcagcggcgtgc
ggtggcctcatctactttgtcctctacctgccgcatgtcctttgctacgcctggagcgac
gtcatgggtttcggggccaaggttgctgtgagtttgttgtcatgtgtggcttttggctac
ggttgcgagaactttgccaagtacgagcagcaaggcatcggtattcagtggtacaacatt
aacaagagtccagaagatggagaacgctacacattcctcgtgtccatcatcatgatgctc
attgacgccactttacactgggtgctcacctggtacattgagaacatctttccaggtcaa
tatggaatccccaagccatggtactttcctttcactgtgtcctactggagtgggaaacca
tcagtgactaacgctgacccagacttgctgaaggacaccattgtacattccgagtatctg
gagaaaccaccacccaatatgaaagccggggtgtctatccgtaatcttgttaaaatctac
aagactggaaagaagcttgccgtggacggactgagcatggacttctacgagaatcagatc
acatcttttctcggccacaatggagccggaaaaacaacaacaatgtcaattctgacagga
ctgttcccgcctacgtcaggaaccgctctcatcaacggatatgacatccacgttgacatg
gacagcatccgaaagtacttaggaatgtgcccgcagcacaacgtcttgttcaatgagctg
actgtggaggagcatatctacttctacgccaggctgaaaggactcagcagcaaagaggtg
aaaattgagatggaccagatgattgaggatgttggtttaccacataagcggaaggatctt
gctaagaacctgtcaggtgggatgcagaggaagctgtctgtggctatagcatttgtcggc
ggctcaaaaatcgtcatcctagacgagcctacagcgggagtggacccctttgcccgcagg
agtatctgggaactgctgttaaagtacaaacaaggtcgcaccatcattttgtctacacac
cacatggacgaggcagacatcttaggcgatcgcatcgccatcatctcccacggcaagatg
cgttgttgcggctcctcgatcttcctcaagaaatgttttggcagcggctactatctcact
ctggtgcgagaggggattgaaaagatgacagctcagcgtaacggtatcatacacagtcag
gccaaagaggagaaagactatccatcaaggagaagcagtctggatgatggcattggcagc
cagacctggagcaactctgatccctcagatttgacagctgtgggtcaacttgtccggcgc
cacgtccctgaggcggccttcttggagagcatcggtcaggagatcacctacatactgcct
tatacgggagccagagatgggacctttgccctgctctttcaagagctcgacttggccatg
gctgacctcggcctgaccagctacggcatctctgacaccacactggaggagatcttcctt
aaagtggcagaagatactggagtagatgcagaaatgaacacaacaaaggagctgttggtg
agagactgcaaaagaagctcctgcgcatccaagcggaacagcatcgccagcgtccacatt
aaaacagaacaagtctctggaatgagtgaattaaagttcacaagcaaagtagaagactta
aagaagaatgccagtgtcagtgggaagggatccacggtcatcaccggatggaaactgatc
aggaggcagttcctcgcgctctttatcaagcgcttccactacgcccgaaggagccgcaag
ggactcattgcccaggtggtgttgcctgctgtttttgtgtgcctgtctctgatcttctcg
ctcatcgtcccaccatttactgaatatccgaaactggagctgcaaccctggatgtacggc
ctgcctcaaactacctttttcagcaacgatctgccagataatgtggaggtgtcacaggtg
gtgaaaaccatggtgaatgcgcctggctttgggactcgctgcatgaatggaaacccaata
ccgaagttaccgtgttcctctagtggctctgattggttcactccatctgtggatcagtct
atcactgacatcttcctcaacgggaactggagcatgtctaatccttcccccaactgtcag
tgcagcactcctaaacggacaatcatgttacctgactgtccacccggtgcaggagggctc
cctccacctcagaggatccagaacacaacagacacactgctggatttaactggacggaac
atgacagacttcttgatcaagacttttgagaactcgggtaaaacaaggtacggagggatc
tctgtcggagcaatcaactcccaagtccgtctgaacgaggcagcaatcgaagctgcgttc
agggatcttaaagacctattcagttcacttcaggataatgtgactgatcagatcctcccg
aaggctgagacgctgctgaagaagctgggaaccagggacaacgtaaaggtgtggttctat
aaccaagcatggcacggcatgccgtccttcctcagcgtggccggcaacgccatcctgagg
ggaaatctgccggcaggaaaggatccacgccaatacggtatctctgtgtccaatcacccc
ctcaacctcaccaaggagcagctctcctatgctgccatggccacaagctccactgacgtg
gtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtcctcttc
ctcatccaagagagggtgaacaaagccaagcacctgcaatttgtcagcggagtaaaccca
gctgtctactggttggccaattttgcctgggacatgtgtaactacgtcgtcccgtgcttg
atcgtgattgtgatcttcctctgcttccaacaaaaagcctacgtttcacctcctaacctt
ccggctttgatcctgcttcttgttatgtatgggtggtccatcacccccatgatgtacccg
gcctccttcatcttcagcgtaccgagcacagcctacgtggtgctaacctgcatcaacctc
ttcattggtatcaacggcagcgtggccacctttgtcatggagctctttgacgatgaaaac
gtctcccacatcaacgagatagtgaagcaggtgctgctgatattcccgcatttctgtctg
ggcagagggctaattgacatggccaagaaccaagcaatggccatcctctacagcggtttt
ggcgaagaccgtttcgaagacccactcagctgggatatggtgggaaagaacctgtgtgcc
atgtcaatccagggaactgtcatgttcgccatcacaatcctcatccagtacaagttcttc
tgcaaaccaaggctcatttcagggaagtcattatctgcagaggaagaggatatcgatgtc
gctcgggagcgtgagcgggtctatgaaggcaaggcccacaaagaccttctgaggatctgt
gacctcactaaggtatactctcggaagagcactcctgctgtggacaggctatgtgtgggc
gtacctgccgcagagtgtttcgggttgctgggaatcaacggggctgggaaaaccaccacg
ttcaagatgctgacaggagacatcccagtctccagtggagaggccttcgtaaatggatac
agcatacgaacagaaatgagggacgtccatcaaaacttgggttattgtccccagtttgac
gctattgatgagctgctgactggaaaagagcatctggagttttacgcaaggttacgaggg
gttccagaagacgaggtcaccatggtggccgagtgggggatccagaagttgggcctggtc
aaatattccaacaagtcagcaggaacctacagcggtgggaacaaacgcaaactttcgaca
gcgatagccctgatcggttgtcctcctgtgattttcctggatgagccaaccaccgggatg
gaccccaaagctcggcgctttctgtgggactgcatccttagtatcatcaaagagggacgc
tcagtcattctcacatcacacagcatggaagaatgtgaagcactgtgcacacgcatggcc
atcatggtaaacggtcgcttcaagtgtttcgggagcatccagcatctgaagaacagattt
ggtgatggctacacagtgattgtgagggttggtggctctcctccagcattgaaaccagtt
gaagactttgtccagcagaccttcccaggaagcgtcctgaaggagaagcatcacaacacg
ctgcagtatcagctcccacgcacacagggggctttggccaacatcttcggccagttcacc
agccaccagcagaggctcagtgtggaagactactccgtgtcccagactactctggatcag
gtctttgtgaattttgcaaggcacaagcctgaggaggatgactctcagtcctatgacaac
cgagtggacacctcagatgagctgccactggaagctatgaagtcctcacaagaagcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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