KEGG   Larimichthys crocea (large yellow croaker): 104937907
Entry
104937907         CDS       T04659                                 
Symbol
lars2
Name
(RefSeq) probable leucine--tRNA ligase, mitochondrial
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    104937907 (lars2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lco01007]
    104937907 (lars2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lco03016]
    104937907 (lars2)
   03029 Mitochondrial biogenesis [BR:lco03029]
    104937907 (lars2)
Enzymes [BR:lco01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     104937907 (lars2)
Amino acid related enzymes [BR:lco01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   104937907 (lars2)
Transfer RNA biogenesis [BR:lco03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    104937907 (lars2)
 Prokaryotic type
    104937907 (lars2)
Mitochondrial biogenesis [BR:lco03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    104937907 (lars2)
SSDB
Motif
Pfam: tRNA-synt_1 tRNA-synt_1g tRNA-synt_1_2 Anticodon_1 tRNA-synt_1e
Other DBs
NCBI-GeneID: 104937907
NCBI-ProteinID: XP_027142309
Position
XIII:19956988..19987455
AA seq 904 aa
MQVSVRRLALYPLGAVRSGQIRCSLLSPVPRLLSPRARTLFSETGVWEKDYRTETRRRVE
EWWHPRIMAQWQKDAVEQGSNRKKFYVLSMFPYPSGRLHMGHVRVYTISDTIGHFQRMRG
HQVLNPMGWDAFGLPAENAAIERGLDPEDWTKHNIQSMREQLDSLGLCFNWDREVTTCLP
DYYRWTQYLFIKLFEAGLAYQKEAVVNWDPVDQTVLADEQVDENGRSWRSGALVEQKLLT
QWFIKTTDYAKPLLDALADLPEWYGVKAMQANWIGDCTGCYFDFKLKVNGEETGETLSAY
SSSPEMVFGAAYLAILPSHRLLHGSSSVRSVLEKAYQPGRDSLTEVTAHNLFTGHEVPLV
ISHKEAFDGYLDTVIGIPDCSEEDLSVSKALNLRWTTVLKGGEDETQTLINSDEFSGLTR
EEAFHSITQKAREQKVGGHLTSSKLRDWLISRQRYWGTPIPVVHCGSCGPVAVPEEELPV
TLPKLPSLTGKGASPLEAAHDWVSCKCPRCKGPARRETDTMDTFVDSAWYYFRYTDPRNP
NRPFERDLVDHWLPVDVYIGGKEHAVMHLYYARFLCHFCRDQGLVTHREPFWKLLVQGLI
KGQTFKLADSGQYLKREEIDFTGKEPVAYGGGPIEVTWEKMSKSKHNGLDPQEVVQQYGV
DTVRLYILYAAPPEQDILWNVKTDALPGVLRWQSRLWQLVTKLRGARELGDVPNPSLLKK
KELGETKKIWDNKNYAIQEVTSHFTEDFLLNAAISRLMGLTNTLSSATARVVQHSVEFEE
SLAALVMMTAPMAPHLASELWAGLCQVKNPLSPLLQQGGDVLQQSWPTVDPEYLDVPDFV
ELSVLINNKACGKVTVPLQVSKDSERVQQLILESPFGQKLLGERSIKRAILSPRTALINF
LVDE
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgcaggtgtcggtgagaaggctggctctttatccgctgggcgctgtccggtccggccaa
atcaggtgttccctcctgagcccagtaccccgcctcctgtcccccagagcccgtacactg
ttcagtgagacaggtgtatgggagaaggactatcgaaccgagacccgacgcagagtggaa
gaatggtggcacccacgaattatggcacagtggcagaaagatgcagtggagcagggttcc
aacaggaagaagttttatgtcctctccatgtttccatacccatcggggcgactgcacatg
ggccacgtgcgagtgtataccatcagtgacactatcggccacttccagagaatgagaggc
catcaggtgttgaatccgatgggttgggatgcttttggacttccagcagaaaacgcagcc
attgagcgaggcctcgacccagaggactggactaaacataatatccagtccatgcgggag
cagctggacagcctcggtctttgcttcaactgggaccgggaggtgaccacctgtcttcca
gactactacaggtggacgcagtatctgtttatcaagctctttgaagcagggctggcgtat
cagaaagaggctgtggtgaactgggaccctgttgatcagacagtgctggctgatgagcag
gtggatgaaaacggtcgctcctggaggtctggcgccctggtggagcagaagctgctcaca
caatggttcatcaagactacagactatgccaagcctctcttggacgccttggcagatctt
ccagagtggtacggtgtcaaagcaatgcaggcaaactggattggagactgcaccggctgc
tactttgatttcaaactcaaggtgaacggagaggagacgggggagaccctgtcagcctac
agctcgtccccagagatggtgttcggcgctgcttacttggctatcctgccgtcccacaga
ctgctgcatggtagtagctcagtccgctctgtcctggagaaagcctatcaacctggcaga
gactccctaaccgaggtcactgctcacaacctgttcaccggccacgaggttcccctggtc
atctcacacaaggaggcgtttgacggctatctcgataccgtgattggtatcccagactgc
agtgaggaggatctgtctgtgtccaaagctctaaacctgaggtggaccactgtgctgaaa
ggcggtgaagatgagacacaaactctgattaactctgatgagttctcaggcctcaccaga
gaagaggcatttcactccattacccagaaggccagagagcagaaggttggtggccacctt
accagctccaagctcagggactggttgatatcaagacagcggtactggggcacacccatc
cctgtggtgcactgtgggtcttgtggtccagttgctgtccctgaggaggagttaccagtc
acattacctaaactgccgtctctcacaggaaagggtgcgtcgccgctggaggctgctcat
gactgggttagctgcaaatgtcccagatgcaagggcccagcgagaagggagactgacacc
atggacacatttgtggactcagcctggtattactttagatacacagaccctcgtaaccca
aacaggccttttgagcgcgacctagtggatcactggctgccggtggacgtgtacattgga
gggaaggagcacgctgtcatgcacttgtactacgctcgcttcctctgtcacttctgcagg
gaccagggtcttgttacccacagggagcctttttggaagctgctggtccagggtctgatc
aagggccagaccttcaaactggcagacagcggccagtacctaaaaagagaagaaatagac
ttcacaggtaaagagccggtggcatatggtggtggtcctattgaggtgacgtgggagaag
atgagcaagtctaaacacaatggtctggacccccaagaggtggtccagcagtatggtgtg
gacaccgttcgactctacatcctttatgccgcaccacctgaacaggacatcctctggaat
gtgaagacggacgccctccctggggttctgcgatggcagtctcgcctctggcagctagtg
accaagctgaggggggctcgggaattaggagatgtccccaacccctccctgctgaaaaag
aaagagctgggcgagaccaagaagatctgggacaacaagaactacgccattcaggaggtg
acctctcacttcacagaggacttccttttaaatgcagccatttctcgcctgatgggactt
accaatacactgagtagtgcaacagccagggtggtccagcacagcgtggagtttgaggaa
tctctggctgcattggtaatgatgacagctcccatggcccctcacctggcttctgaactc
tgggcaggtctttgccaggtgaaaaatcccctcagccccctcctccagcagggaggagac
gtcctccaacagtcctggcccactgtggaccccgagtacctggatgtccccgactttgta
gagctgtctgtactgataaacaacaaggcctgtgggaaagtgacggtgcctctgcaggtg
tccaaagattcagagcgggtgcagcaactaatcctggagagccctttcggacagaagctt
cttggcgagcgcagcatcaagagagccatcctatcccccaggaccgctctcatcaacttc
ctcgttgatgagtga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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