KEGG   Lysobacter capsici: LC55x_1560
Entry
LC55x_1560        CDS       T04162                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
lcp  Lysobacter capsici
Pathway
lcp00521  Streptomycin biosynthesis
lcp00523  Polyketide sugar unit biosynthesis
lcp00525  Acarbose and validamycin biosynthesis
lcp00541  O-Antigen nucleotide sugar biosynthesis
lcp01100  Metabolic pathways
lcp01110  Biosynthesis of secondary metabolites
lcp01250  Biosynthesis of nucleotide sugars
Module
lcp_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LC55x_1560 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LC55x_1560 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    LC55x_1560 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LC55x_1560 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    LC55x_1560 (rfbB)
Enzymes [BR:lcp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LC55x_1560 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: ALN84851
UniProt: A0A0S2FN63
Position
1760846..1761898
AA seq 350 aa
MPTWLVTGGAGFIGGNFVLDAVQRGIKVVNLDVLTYAGNLDTLSVLDGDARHVFVQGDIG
DAALLKRLLAEHRPDAVINFAAESHVDRSIDGPAAFVQTNVVGTLSLLEQVRDYWKALDA
PARDGFRFLHVSTDEVYGSLGDSGKFSETTQYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPFQFPEKLIPLIIAKALAGEPLPVYGDGLNVRDWLFVGDHCSAIARVLEA
GRVGETYNVGGDAERPNIVVVQTICALLDQRRPLADGRARESLITYVKDRPGHDRRYAID
ASKLKNELGWTPTLTFEQGIARTVDWYLDNQPWVQRVLDGSYRLERIGQA
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgcccacttggcttgtaaccggcggcgccggcttcattggcggtaatttcgtcctcgat
gcggtccagcgcggaatcaaggtcgtcaacctcgacgtcctgacctacgccggcaatctc
gacaccctcagcgttctcgatggcgatgcgcgtcacgtcttcgtccaaggcgacatcggc
gatgcggccctgctcaagcgcctgctggccgagcaccgacccgacgcggtgatcaacttc
gccgccgagagccacgtcgaccgttccatcgacggcccggccgcgttcgtgcagaccaac
gtggtcggcaccctgagcctgctcgagcaggtgcgcgattactggaaggcgctcgatgcg
ccggcgcgcgacggcttccgcttcctgcacgtgtcgaccgacgaggtctacggctcgctc
ggcgacagcggcaagttcagcgagaccactcagtacgcgcccaattcgccgtactcggcg
tcgaaggccgcgtcggatcacctggtccgcgcgttccaccacacctacggcctgccggtg
ctgaccacgaactgctcgaacaactacgggccgttccagtttccggaaaaactcattccg
ctgatcatcgccaaggccctggccggcgagccgctgccggtctacggcgacggcctcaac
gtgcgcgactggctgttcgtcggcgaccattgctcggcgatcgcgcgcgtgctcgaagcc
ggccgcgtcggcgagacctacaacgtcggcggcgacgccgagcgtcccaacatcgtcgtg
gtccagaccatctgcgcgctgctcgatcagcgccgtccgctggccgacggccgcgcgcgc
gaatcgctgatcacctacgtcaaggaccgcccgggccacgatcgccgctatgcgatcgac
gcgtccaagctcaagaacgaactgggctggaccccgaccctgaccttcgaacaaggcatc
gcgcgcaccgtcgactggtatctggacaaccagccgtgggtgcagcgcgtgctcgacggc
agctaccggctcgaacgcatcggccaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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