KEGG   Companilactobacillus crustorum: BI355_0436
Entry
BI355_0436        CDS       T04712                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lct  Companilactobacillus crustorum
Brite
KEGG Orthology (KO) [BR:lct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lct03016]
    BI355_0436
Enzymes [BR:lct01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     BI355_0436
Transfer RNA biogenesis [BR:lct03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BI355_0436
 Prokaryotic type
    BI355_0436
SSDB
Motif
Pfam: PseudoU_synth_1 Pus10_C
Other DBs
NCBI-ProteinID: APU70788
Position
466077..466820
AA seq 247 aa
MTRYKLTIAYDGTKFHGFQRQNELRTVQGVVEKALTKMTKGQHIDVVGSGRTDAGVHALG
QVIHFDYPGQIPADNMQRAVNSLMPLDILVKDATIVDENFHARFGVKKKTYQYRVACGHY
TDPFKRFYTGHYPYALSVDKIQIALKDLVGEHDFSSFAASGGVIENKVRTIYSATAVYNK
NNDEIVFEFTGNGFLYNMVRILVATLLEIGNGRRDVHDFLRLFEVKDRQEARGTAPASGL
YLKEVFY
NT seq 744 nt   +upstreamnt  +downstreamnt
atgacaagatataagttaaccatcgcttatgatggcactaagtttcatggatttcagcgt
caaaatgaattacgaacggttcaaggagtagttgaaaaagctttaactaagatgactaag
gggcaacatatcgatgtagttggatcaggacgaactgatgcaggagtacatgccttaggt
caagtgattcattttgattatcctggacaaataccagctgataatatgcagagagcggtc
aattctttgatgccactagatattttggtaaaagatgcaactattgtagatgagaatttt
catgcgcgctttggagtaaagaaaaaaacttaccaatatcgagttgcttgtggacattat
acagatccttttaaaaggttttacacaggccactatccctatgcgctatctgtggataaa
attcaaatagccttgaaggatttagttggggaacatgatttttctagttttgcagcttct
ggtggcgtgattgaaaataaagttaggactatctattctgcgacagccgtgtataataag
aacaacgacgaaatagttttcgaatttacaggcaatggcttcctatataatatggtcaga
attttagttgctactctattagagatcggtaatggacgcagagatgtacatgatttcttg
agattgtttgaagtaaaggatcgccaagaagctcgtggtacggctcctgcaagcgggtta
tatttaaaagaagttttttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system