KEGG   Lentilactobacillus curieae: PL11_009560
Entry
PL11_009560       CDS       T04707                                 
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lcu  Lentilactobacillus curieae
Pathway
lcu03030  DNA replication
lcu03430  Mismatch repair
lcu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PL11_009560 (polC)
   03430 Mismatch repair
    PL11_009560 (polC)
   03440 Homologous recombination
    PL11_009560 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcu03032]
    PL11_009560 (polC)
   03400 DNA repair and recombination proteins [BR:lcu03400]
    PL11_009560 (polC)
Enzymes [BR:lcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PL11_009560 (polC)
DNA replication proteins [BR:lcu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PL11_009560 (polC)
DNA repair and recombination proteins [BR:lcu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PL11_009560 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI tRNA_anti-codon HHH_6 HHH_3 RNase_H_2 DEDDh_C YhfH Zn-ribbon_8 T2SSK
Other DBs
NCBI-ProteinID: AQW22376
UniProt: A0A1S6QL88
Position
complement(1974822..1979120)
AA seq 1432 aa
MFQKLLEQLKWFEMKDDPVFENARLDKLEVHEKSRKWQFDISTNTILPFDVFDQLNDRLQ
ASFNEIANVSFIIKPTQSHFDENLLKDYWEWIVTNSGVTSPLLKELCDNHLPYMNGDRVE
FSAENEIVKNFMTNTALGPIEDLYRRAGFPNFSIHTIVDETASQKNIEAMRKRNEANGAE
LVKKANAAMKLNEAKQKKQSSNNSSSSIGKKIKPDIPITKMVDIQDEERSVVVEGYVFSK
EVRALRSGRELLMLKVTDYTSSISIKKFSGKNEQGAFDNVDEGAWIKVRGSVQEDNYSHE
LTFMANDINPFNHTSKKDLAPEDEKRVELHLHTSMSQMDATNNIADFAKRAKQWGHPALA
ITDHSGVQGFPDAFHAGEKNDLKMLYGVEINLVDEGVPITYNDTHIPLKDATYVIFDVET
TGLSAIYDRVIELSAVRMENANVVAQFEEFIDPGFHLSEQTTNLTSITDDMVRGSKSEEE
VFKLFREFCGDSIIVGHNVTFDVGFMNTGYKRHGMSEISNPIIDTLTLARFLYPHLKGYR
LNTLAKKFDVSLEHHHRAVYDAESTGHLNYIFLKDAEEKYGIQYHDQLNDHMADNDAYKH
ARPSHAVLLAKTQAGLKNMFKIVSLSNVEYFYRVPRVPRKQLEKYRDGIIVGSACSSGEV
FTAMMQKGMEEAREKAKFYDYLEVQPPRVYQPLIESGLISDENKLHEIIQNMIDLGDELD
KPVVATGDVHYLDDHDYIYRKILINSQGGANPLNRQTLPDQHFLSTDEMLAEFDFLGEEK
AKEIVVTNTNAIADSIDEVHPLKDKLYTPRMEGAEDEIQSKTMNTAHEMYGDPLPEIVEK
RLEKELKSIIGNGFSVIYLIAQRLVHKSNKDGYLVGSRGSVGSSLVATLTGITEVNPLPP
HYRCPNCQHSEFFTKGEYSSGYDLPEKNCPECGTQMIGDGHDIPFETFLGFTGNKVPDID
LNFSGDYQPIAHNYTKVLFGEKNVFRAGTIGTVADKTAYGYVKAYERDTGKTFRQTEEDR
LSKGATGVKRTTGQHPAGIIVVPDYMDIYDFTPIQFPADDRSAAWKTTHFDFHSIHDNIL
KIDILGHDDPTMIRMLQDLSGINPKTIPMDDPGVMSLFSSPEVLGVTEDQIQSKTGTLGV
PEFGTRFVRGMLEETHPSNYSELLQISGLSHGTDVWIGNADELIKNGTATIANVIGCRDN
IMTDLIHWGLDSELSFQIMEHVRKGRGIPDDWQAEMKKANIPDWYIQSCLKIKYMFPRAH
AAAYILMALRIAYFKVYFPLVYYAAYFSVRADDFDIVSMSRGKEAVKNAMQAINDKGMDA
STKEKNLLTVLELANEMLERGYEFKMVDLDKSDASEWLIDGNSLIAPFDSVPGLGLNVAK
QIVAAREDRPFISKEDLAKRGKVSKTLIEFMTENGILEGLPDENQLSLFDMM
NT seq 4299 nt   +upstreamnt  +downstreamnt
atgtttcaaaagcttcttgaacaacttaaatggtttgagatgaaagatgaccccgttttt
gaaaatgcacgcttggacaaactagaggtgcatgaaaagagtcgcaagtggcaatttgat
attagtactaatactattctgccatttgatgtgtttgatcagcttaatgatcgtttgcaa
gctagttttaatgagattgccaatgtgtcattcattatcaaacccactcaaagccacttt
gacgagaatttattaaaggattattgggaatggattgttaccaattcaggagttacatct
ccacttttaaaggagctgtgcgataatcatttgccatatatgaatggtgacagggtagag
tttagcgctgaaaatgaaatcgttaagaactttatgacaaatacggcacttggcccgatt
gaagatttatatcgccgggctggtttcccaaacttttcaattcatacgattgttgatgaa
actgcctcacaaaaaaacattgaggcaatgagaaaacgaaatgaagctaatggtgctgag
ttagtgaaaaaagccaatgcggctatgaaactaaatgaggctaaacaaaagaaacaaagt
tctaacaatagctcaagctcgattgggaaaaagattaagcctgatattccgataaccaag
atggttgatattcaagacgaggagcgttcggttgtcgttgaaggatatgtattttcaaag
gaagtccgggcgttacgttctggccgtgaattgttgatgttgaaggtaaccgactacacc
tcgtcaatttcaatcaaaaaattctctggtaaaaatgagcaaggtgccttcgataatgtg
gatgaaggcgcttggataaaggttagaggaagtgtccaagaagacaattactctcatgaa
ttgacatttatggcaaatgatattaatccattcaatcacacttcaaaaaaggatcttgca
ccagaagatgaaaagagagttgaactccacttacacacttctatgagtcagatggatgct
accaacaatattgcagattttgcaaaaagagctaaacaatggggacatccagcgttggcg
attacagatcattctggagttcaaggatttccggatgcttttcatgctggagaaaaaaac
gatttaaagatgctttacggtgttgaaataaaccttgtagatgagggtgttccaattacc
tacaatgatactcacataccgttaaaagacgctacgtatgtcatctttgatgtggaaaca
actggtttgtcagcgatttatgatcgcgtaatcgagttgtcagctgttaggatggaaaat
gcaaatgtagttgctcagtttgaagaatttattgatcctggattccatctgtctgaacaa
acgactaatttaacgtcgattactgacgatatggttcgtggttcaaagtctgaggaggaa
gttttcaagctattccgtgaattttgtggcgactcaattattgtcgggcataacgtgacg
tttgatgtcgggttcatgaatactgggtacaagcgtcatggaatgtcagaaatttccaac
ccaattattgatacgttgacgttggcacggttcttatatcctcatttaaagggataccga
ctaaatacattagcaaaaaaatttgatgttagtttggaacatcatcaccgtgccgtttat
gatgctgaatcaactgggcatttaaattatatcttcttgaaagacgctgaggaaaagtat
ggtattcaataccatgaccagttaaatgatcatatggcggacaacgatgcgtataagcat
gctagaccaagccatgcggtgttgttagcgaagacccaggcagggttgaaaaacatgttt
aaaatcgtttcactttcaaatgtcgagtacttctatagggtgcctagagtacctagaaaa
cagcttgaaaaataccgtgatggcatcattgttgggtctgcttgctcaagtggtgaagtt
tttacagccatgatgcaaaagggaatggaagaggctcgtgaaaaggctaagttctatgac
tacttagaagtacaaccaccacgggtatatcaaccattgattgagtctggcctgatctct
gacgagaacaagctccatgaaattattcaaaacatgatagatttaggtgatgaacttgat
aagccagttgttgcaacaggtgatgttcattaccttgatgaccatgactatatttaccga
aaaattttaattaattctcaaggtggggcaaatccgctaaaccggcaaacattgcctgat
caacattttttgagtactgacgaaatgcttgctgaatttgatttcttaggtgaagagaaa
gctaaagaaatcgtggttaccaatactaatgccattgctgacagtatcgatgaggttcat
cctctaaaggacaaactttacactcctcgaatggaaggagcagaggatgagattcaaagt
aagacgatgaatactgctcatgagatgtacggagatccattacctgaaatcgttgaaaag
cgattagaaaaagaattgaagagtattattggaaatggattctcggttatttatctgatt
gcccaacgattggtgcataaaagtaataaggatggttatttggtaggctcccgtggttct
gttggttcaagtttggttgccacattaactggaataactgaggttaatccattgccacca
cactatcgttgtccaaactgtcaacacagtgagttctttacgaagggtgagtatagctcg
ggttatgatttacctgaaaagaactgtcctgagtgtggcacccagatgatcggtgatggg
catgatattccctttgaaaccttcttaggattcacaggtaataaggttccggatattgat
ttgaacttctctggagactatcaaccaattgcgcataattacactaaggtattgtttggt
gagaaaaatgtgttccgtgccgggacgattggtactgttgctgacaaaacagcgtatggt
tatgtaaaagcatatgagcgtgacaccggtaaaacattcagacaaactgaagaagacagg
ctttcaaaaggggccactggggttaagcggactactggacaacatccagccggaattatt
gttgttcctgactatatggatatttatgactttacgccaattcaattcccagcagatgat
agatcagctgcgtggaagactacccactttgatttccattctattcatgacaacattttg
aagattgatatcttgggtcatgatgatccaacaatgatccgaatgcttcaagatttatct
gggatcaaccccaagactatcccgatggatgatcctggcgtgatgtcattgttctctagt
cccgaagtgcttggggtgactgaagaccaaattcaatccaaaactggaacgttaggtgtc
cctgaatttgggacccgatttgttcgggggatgcttgaggaaactcatcctagcaactat
tccgaactactacaaatttctggattatctcatggaaccgatgtttggattggtaacgca
gatgagttaattaaaaacgggacagcaactattgctaacgttattgggtgtcgtgataac
atcatgactgatttgattcattggggacttgattctgaactatcgttccaaatcatggaa
cacgttcgtaaggggcggggaattccagatgattggcaagcagaaatgaagaaggccaat
atccctgattggtacatccaatcttgtttgaaaatcaagtatatgttcccacgtgcccat
gccgctgcatacattttgatggcgttacgaattgcatactttaaggtttacttcccactg
gtttattacgctgcatatttctcagtgcgagctgacgattttgatatcgtgtcaatgagc
cgcggtaaagaagccgttaaaaacgcaatgcaggccattaacgataagggaatggacgca
tctaccaaagaaaagaatttattgactgttttggaattagccaatgaaatgctagaacgt
ggctatgaatttaaaatggttgatttagacaaatcagatgcttctgaatggttaattgac
ggtaattctttaatcgcaccttttgattctgtacctggtctaggacttaatgttgccaag
cagattgttgcggcacgggaagatagaccgtttatctctaaagaggaccttgctaagcga
ggaaaggtttccaaaaccctgattgagtttatgactgaaaacggtatattggaaggatta
cctgacgagaaccagttaagcttgtttgacatgatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

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