KEGG   Lacticaseibacillus paracasei W56: BN194_15970
Entry
BN194_15970       CDS       T02337                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lcw  Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcw03032]
    BN194_15970 (topA)
   03400 DNA repair and recombination proteins [BR:lcw03400]
    BN194_15970 (topA)
Enzymes [BR:lcw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BN194_15970 (topA)
DNA replication proteins [BR:lcw03032]
 Prokaryotic type
  DNA Topoisomerases
   BN194_15970 (topA)
DNA repair and recombination proteins [BR:lcw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BN194_15970 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 C1_2
Other DBs
NCBI-ProteinID: CCK22544
UniProt: A0A5Q8BQH3
Position
1555195..1557279
AA seq 694 aa
MADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVDNDYEPKYISIRG
KGDVIKSLKKDAKKASKIYLAADPDREGEAIAWHVSHILGLDPKAKNRVVFNEITKDAVK
NAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRE
NEIKNFTPEEYWSLDAEFQKGRSKKFSASFYGLKNKKQALKNNEAVQKILGQVDKTKPFA
VTNVVKKERKRFPSPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLI
TYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTP
DSLTAVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLDQNGVTFRANGSQTKFEGFTK
LYVSSRDSDQKDNILPPLAVGDDVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPS
TYAPTIETIQKRHYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANVESELDGIET
GEADWVKVIDQFYKPFEKEVAHAETGIAKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYA
CSRFPDCRNTKAIVKEIGVVCPKCHIGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGR
DCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggccgacaagaagttagtcattgttgaatcgccagccaaagccaagactattgaaaag
tatcttggccgaacctataaagttgttgcaagtttggggcacattcgcgatctacctaag
agtcagatgggggtcgatgtcgataacgactacgagccaaagtacatttcgattcgcggc
aaaggcgatgtgattaagtcccttaaaaaagatgctaaaaaagctagcaagatttatctc
gcagccgatccggatcgtgaaggagaagccattgcatggcatgtcagtcacattttaggt
ttggatccaaaagccaaaaatcgcgtcgtttttaacgaaattacgaaagatgccgttaaa
aatgcgttcaaaacccctcgtggcattgatatggatcttgtagatgcccagcaggcacgg
cggattttggatcgactggtaggctattccatcagtcctttattatggaagaaagttaaa
aaaggcctgagtgctggccgcgttcaaagtgttgcgctaaagctgattattgatcgcgaa
aatgaaatcaaaaacttcacgccagaagaatactggtcattagatgctgagtttcagaag
ggccgtagtaaaaagttcagtgctagtttctatggcctgaagaataaaaagcaggcttta
aagaacaacgaggccgttcaaaagattttgggccaagtggacaaaactaagccgtttgct
gtgacgaatgttgttaaaaaggaacgcaaacgcttcccatccccgccgttcacaaccagt
accttgcagcaggaagctaaccgtaagttgggattccgcacccgaaagaccatgatgttg
gcccagcaactgtatgaaggaattaacttaggtggtaagttaggcaccgttgggctgatc
acgtacatgcggaccgactcgactcgcgtgtcaaatgttgccaaaactgaaaccagccat
tacctgcatgagaaatacggcgaagcttatgctgctgtcaaaattcgccaaggtaaactg
caggaaggggcacaagatgcccacgaagccattcggccaaccagcacattacggacaccg
gatagtttgacggcagttttggacaaggatcagatgaaactttatcggctgatctggagt
cggtttgttgccagtgaaatgaccccggcgattattgacactgtggccgtgacgttagac
caaaacggtgtgactttccgcgccaacggtagtcagactaagtttgaagggtttaccaag
ttgtatgtctcatcacgtgacagcgatcaaaaggacaatattttgccaccgcttgcagtt
ggtgatgatgtcaaaatgttgaagaccgatccggctcaacactttacacagccaccagcc
cgttactcggaagcaaaccttgtcaaagcgcttgaagaaaatggcgttggtcgtccgtca
acttatgcgccaactatcgaaaccattcagaaacgtcactacgtgaaactgaatgctcgt
cggtttgaaccgactgaattaggtgagatcgtcaacagcttgatcgttgaattcttcccg
gacatcgtgaatatcaagtttacggcgaacgtcgaatctgaacttgatgggattgaaacc
ggcgaggctgattgggttaaggtaattgatcagttctataagccatttgaaaaagaagtg
gctcacgccgaaactgggatcgcgaagattcaaatcaaagacgaaccagccggcttcaac
tgtgacatctgcggtgcgccgatggttatcaaaatgggtcgctatggtaagttttacgcc
tgttcccgattcccggattgccgcaacaccaaggccattgtcaaagagatcggggttgtc
tgcccgaaatgtcatatcggtcaagttgttgaacgtaagagcaagcgtaaccgcgttttt
tatggttgctcgcgttatccagactgcgactttgtctcatgggacaaaccagtcggccgc
gattgcccggtctgcggacatttcttagttgagaaaaagagcaaagctggcacccaagtt
gtctgcccaaataacgattataaagaagccttacaaaaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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