KEGG   Lacticaseibacillus paracasei W56: BN194_20220
Entry
BN194_20220       CDS       T02337                                 
Symbol
yhcT_2
Name
(GenBank) Uncharacterized RNA pseudouridine synthase YhcT
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lcw  Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcw03009]
    BN194_20220 (yhcT_2)
Enzymes [BR:lcw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BN194_20220 (yhcT_2)
Ribosome biogenesis [BR:lcw03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN194_20220 (yhcT_2)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CCK22969
UniProt: K0NBE7
Position
complement(2004786..2005688)
AA seq 300 aa
MQKRDGERKKEIGMRYSFTTKVTRSTTVKRWLAEQGVSHRLFKKMLVDHLIWVDGQASDN
GPVEAGQIIRFEIPTSKTLTPEFAPLEVIYEDANWLIVSKPAGLTSVPGPHTPNSSLLNR
IAGYLVEQKIDAPQPAIMTRLDRDTVGLVLAAKHPYAQGRFDQAHQRTLTKHYLAVVSGK
LPSPKGEIDAPLKLAADGIHRIVAADGQTAVTKYRVLKEKTNTLVDVQLLTGRTHQIRVH
FASLGHPLIGDHLYGQPDARIPYQALQATRLNFTDPFSGKQITAELAVPALFNQLLTEAP
NT seq 903 nt   +upstreamnt  +downstreamnt
gtgcagaagagggatggcgaaaggaaaaaggaaataggtatgcgatattcatttacgaca
aaggtgacacggtcgacaacggtcaaacgctggctagcagagcaaggcgtcagtcatcgc
ttgttcaaaaaaatgctagtggatcatttgatctgggttgatgggcaagcatctgacaat
ggtccggttgaagctggccagattatccgctttgaaattccgactagcaaaacgctgacg
ccagagtttgcgcctttagaagtcatttatgaagatgctaattggctaattgtctcaaaa
ccagctggattgacaagcgttcccggaccccacacaccgaattcgagtttattgaatcgt
attgcgggctatttggttgagcaaaaaattgacgcaccacaaccagccatcatgactcga
cttgatcgcgatactgtcggactggtgctggctgcaaaacatccatacgcacaaggccgg
tttgatcaagcacatcaacgcacactgacgaagcattacttggcggttgtcagcggtaaa
ttaccatccccaaaaggtgaaattgatgcacctctgaaattagcggcggatggcattcac
cgaattgtggcagctgatggccagacggcggtgacaaaataccgggttttaaaagaaaaa
accaatactttggttgatgtccagttgctgaccggtcggacacatcaaattcgcgttcat
tttgcaagtttaggtcatccattaattggcgatcacctttatggtcagccagatgcgcga
ataccgtatcaagccttgcaggcgacgcggttgaattttacggatcctttttcgggaaag
cagattacggctgaattggcggtgccggctttgtttaaccaactgctgacagaagcaccc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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