KEGG   Loigolactobacillus coryniformis subsp. torquens: LC20004_07810
Entry
LC20004_07810     CDS       T05341                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lcy  Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:lcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcy03032]
    LC20004_07810
   03400 DNA repair and recombination proteins [BR:lcy03400]
    LC20004_07810
Enzymes [BR:lcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     LC20004_07810
DNA replication proteins [BR:lcy03032]
 Prokaryotic type
  DNA Topoisomerases
   LC20004_07810
DNA repair and recombination proteins [BR:lcy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LC20004_07810
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF2996 Toprim_4 Zn_ribbon_recom
Other DBs
NCBI-ProteinID: ATO43822
UniProt: A0A2D1KP43
Position
1604221..1606296
AA seq 691 aa
MAYKNLVIVESPSKAKTIEKYLGRNYKVVASLGHIRDLPKSKMGVDFENNYEPHYISIRG
KGDVIKDLKKYAKKAEHVYLASDPDREGEAIAWHVSHILGLDPAGKNRVTFNEITKDAVK
NAFKSPRSIDMDLVDAQQARRIMDRIVGYSISPLLWKKVKKGLSAGRVQSIALKLIIDRE
NEIKAFKPEEYWTIDSQFKKGTKKFEASFYGIAGKKKALKNEKAAQEVVDRIDPKADFDI
VKVTKRERKRFPQAPFTTSSLQQEAVRRLNFRTRKTMMVAQQLYEGINLGGRQGTVGLIT
YMRTDSTRISQVAKHEASHFLHENYGEEFAALKIHKTKNPEGSQDAHEAIRPSSVLRTPK
SLEGVLNKDQMKLYQLIWSRFLASQMTPAILDTMAVTIEQNGVTYKANGSKMKFAGFTKV
YDSGKADKKDNMLPDLAEGDTVKLVKNDPNQHFTQPPARFSEATLIKTLEENGVGRPSTY
APTIETIQRRYYVKLEAKRFEPTELGEIVNSIIVDFFPDIVNIDFTAGLENDLDGIEAGK
RQWIKVVDEFYQPFEKEVTSAETKIEKVQIKDEPAGFDCDICGAPMVIKLGRYGKFYACS
RFPDCRNTKPITKEIGVICPQCHEGQVVERKSKKKRIFYGCSRYPDCDFVTWDKPVGRDC
PKDGHYLVEKKVKGGKQVVCPNGDYEEPVQK
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcgtataaaaatctcgtgatcgttgaatcaccatcaaaagccaagacgattgaaaaa
tatctcggccgcaattacaaagtcgtggcgagtctcggccatattcgcgacttacccaaa
agtaaaatgggggtcgacttcgaaaataattacgaaccacattacatttccattcgtggt
aaaggtgatgtgattaaagacttaaaaaaatatgctaaaaaggcggaacacgtttaccta
gcatctgatcccgatcgtgaaggtgaagcaattgcttggcacgtgtcccatattttaggc
cttgatccagctggtaaaaatcgggtcacctttaacgaaatcactaaagatgccgttaag
aatgcttttaaatcaccgcgcagtatcgatatggatttagtcgatgcccagcaagcacgg
cggatcatggaccgaattgttggttattcgatttcgccattattatggaagaaagttaaa
aaaggccttagtgccggccgtgttcaatcgattgctttgaaactgatcattgatcgtgaa
aatgaaatcaaagcctttaagccagaagaatactggacgatcgattcgcaatttaaaaaa
gggacgaaaaaatttgaagctagtttttacggtatcgctggtaaaaagaaagctttgaag
aatgaaaaagcggcccaggaagttgttgatcgcatcgatcctaaggctgactttgatatt
gttaaagtgactaagcgtgaacgtaaacgattcccacaagcaccgtttacaactagttct
ttacagcaagaagctgtacgtcgcttgaatttccgtacacggaaaaccatgatggtggcc
cagcaattgtacgaaggtatcaaccttggtggacggcaagggacagtcggtttgattacc
tatatgcggactgactcaacccggatctcgcaggttgccaagcacgaagccagccatttt
ctccatgaaaactatggtgaagagtttgcggccttgaagattcataaaactaaaaaccct
gaaggctcgcaggacgcccatgaagcaattcgaccatcatctgttttgcggacaccgaag
agtcttgaaggtgttttgaacaaagaccagatgaaattataccaactgatttggtcacgt
ttcttggctagccaaatgacaccagcaattttggatacgatggcggttacgattgagcaa
aatggggtcacttataaagccaatggttccaagatgaagtttgctggttttactaaagtt
tatgattcaggtaaagcggacaagaaggacaacatgctgcctgacttagctgagggcgat
acggtcaagttagttaaaaatgatcctaatcagcattttactcagccaccagcacgtttt
tctgaagcaactttgatcaaaacgctggaagaaaatggcgttggtcggccatcgacttat
gcaccaactattgagacgattcaacggcgctactatgttaagctagaagctaagcggttt
gaaccaaccgaattaggtgaaatcgttaacagtattatcgttgattttttcccggatatc
gtcaatattgactttactgctggattagaaaatgatcttgatggcattgaagctggtaag
cgccagtggatcaaggtcgttgatgagttttaccaaccgtttgaaaaggaagtcacctcg
gcagaaactaagatcgaaaaagtccagatcaaggacgaaccagctggttttgattgtgat
atttgtggggcaccaatggtgatcaaactcggccgttacggtaagttttatgcctgcagt
cgctttcctgattgtcgcaacaccaagccaatcactaaagaaatcggcgttatttgtcca
caatgtcacgaaggacaagtggttgaacgtaagtctaagaaaaagcggatcttctatggt
tgcagtcgctaccctgactgtgattttgtgacctgggataagccggtcggccgtgattgt
ccaaaagatggtcattatttagtcgagaaaaaagtcaaaggtggcaagcaagtcgtttgc
ccaaatggcgattacgaagaacctgtccagaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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