KEGG   Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1209
Entry
LBU_1209          CDS       T01957                                 
Name
(GenBank) Primosomal replication factor
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ldl  Lactobacillus delbrueckii subsp. bulgaricus 2038
Pathway
ldl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ldl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LBU_1209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ldl03400]
    LBU_1209
Enzymes [BR:ldl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LBU_1209
DNA repair and recombination proteins [BR:ldl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LBU_1209
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 AAA_19 HBM SLFN-g3_helicase RUBY_RBDX PIF1
Other DBs
NCBI-ProteinID: ADY85394
Position
complement(1271252..1273633)
AA seq 793 aa
MIAEVIVDVAAHQTDRVFEYHIPDDLEVEIGSRVVVPFGRRKVQGFVVAVKKSSDFTGQL
KDLLLVVDEMPPLTPELVALSSDLARQIFAYRISILKTMLPGVMRANYRKILLPNSPRAE
QMPLFAGDPVDLANLEEPSLIKLVKQLLNKGEARIEYLVENKAKKKMVSVYYPLLSAADC
QEILLETRKTASQQRKLLADLAGDFAAYPKSREELTGLGISSATLKAAVSKKWLQEKDQE
KYRRPTKPVAPSRPLDLNDEQAAALSRVSQDIKGRVSQTFLLEGVTGSGKTEVYLQAISQ
ALALGRTALMLVPEISLTPQMVKQVQARFGQQVAVLHSALSEGERYDEWRRIRRGQAQVV
VGARSAVFAPLDNLGLIIIDEEHEGSYKQDNNPRYHARDVAIWRSRYHHCPLILGSATPS
LASRARAQKGVYQLLRLKKRAKSQPLPRVDLLDLKHVQFAGSQFDISCPLAEAIQKRLEK
KEQVILLLNRRGFANFMLCRNCGFVLKCPNCDLSLTMHKDTWTMQCHYCGYQEAVPEICP
NCRDRQIRFLGTGTQKVQEELAELFPQAKILRMDVDTTRRKGSYDKILTSFGQGEADILL
GTQMIAKGLDFPNVTLVGVINADTGLWLPDYNASERTFELITQVAGRAGRADKEGQVMIQ
TYNPDHYAIHLAQKQDYELFYAKEMRVRHAGDYPPYFYTVLVSVSAKNEQNAAREAFKIK
RQLQRELRAPTIILGPAPATISRLKSQYYYQILVKYKREKHLNELLHQIQDQAQEVKKYG
LTVEIDSEPERIM
NT seq 2382 nt   +upstreamnt  +downstreamnt
ttgatcgcagaagttattgtcgatgtggctgcccaccagactgaccgcgtttttgaatac
catatccctgatgacctggaagttgaaattggcagccgggtagtggtgccttttggccgc
cgcaaggtccagggctttgtcgtcgctgtgaaaaaaagcagcgactttaccggccagtta
aaggacctgctcttagtggtcgatgaaatgccgcctttgactcccgagctggtcgccctg
tccagcgacctggcccggcagatttttgcctaccggatcagtatcctcaagaccatgcta
ccgggggttatgcgggccaattaccggaaaatcctcctgccaaacagcccgcgggcagag
caaatgcctctttttgcgggagacccggtggatttggccaacttagaagagccgagtctg
atcaagctggtcaagcagctcctgaataagggggaggccaggatagaatacctggttgaa
aataaggcgaaaaagaagatggtttcagtctactatccgcttctgtcggccgctgactgc
caggagattcttttagaaactagaaaaacggccagccagcaaagaaaattgctggcagat
ttggccggggactttgcggcttatcctaaaagccgggaagaattgaccggtctgggcatc
agttcagcaactttaaaagcggcggtcagcaagaaatggctgcaggaaaaagaccaggaa
aaataccggcggccaaccaagccggttgctcccagccggcctttagacctaaatgacgag
caggccgcggccttgagccgggtcagccaggacatcaagggccgggtcagccagaccttt
cttttagaaggagtgacagggtccgggaaaaccgaagtctacctgcaggcgatcagccag
gccctggccttgggcaggacagccttgatgctggtgccggaaatttccctaaccccccag
atggtcaagcaggtccaggcccgctttggccagcaggtggcggttttacactcggccttg
tcggaaggtgagcgctatgacgaatggcgcaggatccgccggggtcaggcccaggtggtc
gtaggcgctagaagcgcggtttttgcccccttggacaatttaggcctcatcattatcgat
gaagagcatgaaggctcctacaagcaggacaacaatccccgctaccatgcccgggacgtg
gcaatttggcggtcccgctaccaccactgtcccttgattttgggtagcgcgacgccgtct
ttggccagccgggcccgggcccaaaagggggtctaccagctcttgcgcttaaaaaagcgg
gccaagagccagcctttaccgcgagttgacctgcttgacttaaagcacgtgcagtttgcc
ggcagccagtttgacatctcctgtccattggctgaggcgattcaaaagcggctggagaaa
aaagagcaggtaatcctgcttttaaaccggcggggctttgccaacttcatgctctgccgc
aattgcggctttgttttaaagtgccctaactgcgacttgtccttgaccatgcataaggac
acttggactatgcagtgccactattgcggctaccaagaagctgttccggaaatttgtccc
aactgccgggaccggcagatccgctttttggggacggggacgcagaaggtgcaagaagag
ctggctgagctttttccgcaagctaaaatcctccgcatggacgtggacacgacccggagg
aagggcagctatgacaagattttgaccagttttggccaaggagaagccgacatcttgctg
ggcacgcagatgatcgccaagggcctggacttccctaatgtaactttggttggggtaatc
aatgctgacactggtttatggctgcccgactataacgcttctgagcggacttttgagctg
attacgcaagtagctggccgggcagggcgggccgacaaggaagggcaggtcatgatccag
acttataatccggaccactacgctatccacctggcgcaaaagcaggactatgagcttttt
tacgctaaagaaatgcgggtccgccatgccggcgactacccgccttacttttacacggtc
ctggtctccgtttcagccaaaaatgagcaaaacgcggcccgggaggcttttaaaatcaaa
cggcaattgcagagggaattgcgggcgccgactattatcttagggccggctccggcaacg
atcagccgcttaaagagccagtattattaccaaatactggtaaaatataaaagagaaaaa
cacttaaatgagctcctgcaccagatccaggaccaggcccaggaagtgaaaaagtacggc
ttgactgttgagatcgattcagagccagagagaattatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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