KEGG   Leishmania donovani: LDBPK_360860
Entry
LDBPK_360860      CDS       T02289                                 
Name
(RefSeq) hypothetical protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
ldo  Leishmania donovani
Pathway
ldo03022  Basal transcription factors
ldo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LDBPK_360860
  09124 Replication and repair
   03420 Nucleotide excision repair
    LDBPK_360860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ldo03021]
    LDBPK_360860
   03400 DNA repair and recombination proteins [BR:ldo03400]
    LDBPK_360860
Transcription machinery [BR:ldo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LDBPK_360860
DNA repair and recombination proteins [BR:ldo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LDBPK_360860
SSDB
Motif
Pfam: Tfb2 Helicase_C_3
Other DBs
NCBI-GeneID: 13388088
NCBI-ProteinID: XP_003865202
UniProt: A0A3S5H816
Position
36:291336..293009
AA seq 557 aa
MPSSSSALDVPLVEVICSYPTREGLCAECPALLLLVYQHVVAELQAGRRAVDVFRGTSRQ
DHLSELLGVRSLSELFEHLYPLSQSCTLDESTAGSQFWRQARATLEAAWAPPHDAKARAL
LTQVRGQPRFRFCGPRDAETPGEGYPLHPVSLERALATSKRFLRTAMTCALDGSTDALAG
RQPELRAVLQLAHLVPDTPSTGAPPRKEVTPEGISFCMVSLQQRWWVLVNAALERVLLLT
RAAANGNGNTSGSSGVTKPLLWQLLAVLSVLDTAHYVFAFPERQQDLAAHHLLARLSEVG
LVYPLLSNDRKCFVLSPDFLHAIHWHASTPLSLTFNHHLLRSVSGVSDIRREDTDTIITE
TNFRLYAYTDDADLLNILNQFAKLEEIVNGNLHCYRVTRDSFASAMRKGITAAQVLRFLS
LRAHPSMLRRHGEREENGDTTSPSSAGGASSSFTFSASPRRRAVAGTCGSTTSIDAVSTL
VVPQSFCDQMHMWESECRRVVFEHHVVLLRNMSTEQQKAVTAYLIDAGEVDAVAHAERGY
MVIREEVFERLVAPLLR
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgccctcgagctcctcggcattggacgtgccgcttgtagaagtcatctgcagctatccg
acccgcgaggggctatgcgccgagtgccctgcactgctgctgctcgtctaccagcacgtt
gtagcggagctgcaggcggggcgacgcgccgtggatgtgttccgtggcacctcgcggcag
gaccacctgagcgaattactcggcgtgcgctccttgtcggagctgtttgagcatctctac
ccgctgtcgcagtcttgcaccctcgatgagagcactgcgggctcgcagttctggaggcag
gcacgggctaccttggaggccgcgtgggcgccgccgcacgacgcaaaggcgcgtgccctt
ctcacgcaggtgcgcggccagccgcgattccgcttttgcgggccgcgcgacgccgagacg
cccggggagggctatccactgcaccctgtatcgttggagcgggccttggcaacaagcaag
cgcttcctccgcactgcgatgacctgcgcactggacgggtcaacggatgccctggccggg
cggcaaccggagctgcgcgcggtgctgcagctggcccaccttgttcccgatactccgtcg
acgggagcgcctccgagaaaagaagtcacgccggaggggattagcttctgcatggtgtcg
ctgcagcagcggtggtgggtactggtgaacgcggcgctggagcgcgttctgctgctcact
cgcgctgccgcgaatgggaacggtaacaccagcggcagcagcggcgtcacaaaaccgctt
ctctggcagctgctggcggtgctgtctgtcctagacactgcgcactacgtcttcgccttc
ccagaaaggcagcaggatctcgcggctcaccatcttctcgcacggctgtccgaggtcggg
ctggtgtaccccttactcagcaacgaccgcaagtgctttgtcttgagtcctgacttcctg
cacgccattcactggcacgcgagcacgccgctgtccctcaccttcaatcatcacctcctg
cgaagcgttagcggcgtcagcgacatacgtcgcgaggacaccgacaccatcatcaccgaa
acgaacttccgtctgtacgcgtacaccgacgatgctgacctgctcaacattttgaaccag
ttcgcgaagctggaggagatcgtgaacgggaatctccactgctaccgcgtgacgcgggac
agctttgcctccgcgatgcgcaagggcatcaccgctgcacaagtcctacgctttctttcg
ctgcgagcgcaccccagcatgcttcgccggcacggggagcgggaggagaacggtgacacg
acgtcgccatcgtctgctggcggcgcctcctcttccttcactttttcagcgtcccctcgt
cgtagggctgttgcgggcacgtgtgggagcaccacctccattgatgcggtgtcgacgctt
gtggttccgcagtccttctgcgaccaaatgcacatgtgggagagcgagtgtcgccgcgta
gtgtttgagcaccacgttgtcctgctacgcaacatgtcaacggagcaacagaaggcggtg
acagcgtatttgatcgatgcaggggaggtcgatgccgttgcgcacgctgagcgcggctac
atggtgattcgtgaggaagtcttcgagcgtcttgtcgcaccacttttaaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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