KEGG T02289: LDBPK

Leishmania donovani: LDBPK_360860

Entry

LDBPK_360860 CDS T02289

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

ldo Leishmania donovani

Pathway

ldo03022	Basal transcription factors
ldo03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:ldo03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ldo03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

398024082

NCBI-GeneID:

13388088

UniProt:

E9BTE5

Position

36:291336..293009

AA seq 557 aa
MPSSSSALDVPLVEVICSYPTREGLCAECPALLLLVYQHVVAELQAGRRAVDVFRGTSRQ
DHLSELLGVRSLSELFEHLYPLSQSCTLDESTAGSQFWRQARATLEAAWAPPHDAKARAL
LTQVRGQPRFRFCGPRDAETPGEGYPLHPVSLERALATSKRFLRTAMTCALDGSTDALAG
RQPELRAVLQLAHLVPDTPSTGAPPRKEVTPEGISFCMVSLQQRWWVLVNAALERVLLLT
RAAANGNGNTSGSSGVTKPLLWQLLAVLSVLDTAHYVFAFPERQQDLAAHHLLARLSEVG
LVYPLLSNDRKCFVLSPDFLHAIHWHASTPLSLTFNHHLLRSVSGVSDIRREDTDTIITE
TNFRLYAYTDDADLLNILNQFAKLEEIVNGNLHCYRVTRDSFASAMRKGITAAQVLRFLS
LRAHPSMLRRHGEREENGDTTSPSSAGGASSSFTFSASPRRRAVAGTCGSTTSIDAVSTL
VVPQSFCDQMHMWESECRRVVFEHHVVLLRNMSTEQQKAVTAYLIDAGEVDAVAHAERGY
MVIREEVFERLVAPLLR

NT seq 1674 nt +upstreamnt +downstreamnt
atgccctcgagctcctcggcattggacgtgccgcttgtagaagtcatctgcagctatccg
acccgcgaggggctatgcgccgagtgccctgcactgctgctgctcgtctaccagcacgtt
gtagcggagctgcaggcggggcgacgcgccgtggatgtgttccgtggcacctcgcggcag
gaccacctgagcgaattactcggcgtgcgctccttgtcggagctgtttgagcatctctac
ccgctgtcgcagtcttgcaccctcgatgagagcactgcgggctcgcagttctggaggcag
gcacgggctaccttggaggccgcgtgggcgccgccgcacgacgcaaaggcgcgtgccctt
ctcacgcaggtgcgcggccagccgcgattccgcttttgcgggccgcgcgacgccgagacg
cccggggagggctatccactgcaccctgtatcgttggagcgggccttggcaacaagcaag
cgcttcctccgcactgcgatgacctgcgcactggacgggtcaacggatgccctggccggg
cggcaaccggagctgcgcgcggtgctgcagctggcccaccttgttcccgatactccgtcg
acgggagcgcctccgagaaaagaagtcacgccggaggggattagcttctgcatggtgtcg
ctgcagcagcggtggtgggtactggtgaacgcggcgctggagcgcgttctgctgctcact
cgcgctgccgcgaatgggaacggtaacaccagcggcagcagcggcgtcacaaaaccgctt
ctctggcagctgctggcggtgctgtctgtcctagacactgcgcactacgtcttcgccttc
ccagaaaggcagcaggatctcgcggctcaccatcttctcgcacggctgtccgaggtcggg
ctggtgtaccccttactcagcaacgaccgcaagtgctttgtcttgagtcctgacttcctg
cacgccattcactggcacgcgagcacgccgctgtccctcaccttcaatcatcacctcctg
cgaagcgttagcggcgtcagcgacatacgtcgcgaggacaccgacaccatcatcaccgaa
acgaacttccgtctgtacgcgtacaccgacgatgctgacctgctcaacattttgaaccag
ttcgcgaagctggaggagatcgtgaacgggaatctccactgctaccgcgtgacgcgggac
agctttgcctccgcgatgcgcaagggcatcaccgctgcacaagtcctacgctttctttcg
ctgcgagcgcaccccagcatgcttcgccggcacggggagcgggaggagaacggtgacacg
acgtcgccatcgtctgctggcggcgcctcctcttccttcactttttcagcgtcccctcgt
cgtagggctgttgcgggcacgtgtgggagcaccacctccattgatgcggtgtcgacgctt
gtggttccgcagtccttctgcgaccaaatgcacatgtgggagagcgagtgtcgccgcgta
gtgtttgagcaccacgttgtcctgctacgcaacatgtcaacggagcaacagaaggcggtg
acagcgtatttgatcgatgcaggggaggtcgatgccgttgcgcacgctgagcgcggctac
atggtgattcgtgaggaagtcttcgagcgtcttgtcgcaccacttttaaggtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system